Xylella fastidiosa 9a5c: XF_0615
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Entry
XF_0615 CDS
T00033
Name
(GenBank) 60kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
xfa
Xylella fastidiosa 9a5c
Pathway
xfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XF_0615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xfa03019
]
XF_0615
03110 Chaperones and folding catalysts [BR:
xfa03110
]
XF_0615
03029 Mitochondrial biogenesis [BR:
xfa03029
]
XF_0615
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xfa04147
]
XF_0615
Enzymes [BR:
xfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
XF_0615
Messenger RNA biogenesis [BR:
xfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
XF_0615
Chaperones and folding catalysts [BR:
xfa03110
]
Heat shock proteins
HSP60 / Chaperonin
XF_0615
Mitochondrial biogenesis [BR:
xfa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
XF_0615
Exosome [BR:
xfa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
XF_0615
Exosomal proteins of other body fluids (saliva and urine)
XF_0615
Exosomal proteins of breast cancer cells
XF_0615
Exosomal proteins of colorectal cancer cells
XF_0615
Exosomal proteins of bladder cancer cells
XF_0615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AAF83425
UniProt:
Q9PFP2
LinkDB
All DBs
Position
complement(594635..596278)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEIIFSEKARSRMVHGVNLLANAVKATLGPKGRHVVLDKSFGSPIITKDGVSVAKEI
ELADKFENMGAQMLKEVASKTNDHAGDGTTTATVLAQALIREGCKAVAAGMNPMDLKRGI
DKAVIAAVTELKKISKPTSDDKAIAQVATISANSDESIGNIIAEAMKKVGKEGVITIEEG
TTLENELDVVEGMQFDRGYSSPYFINNQQSQIVELDNPYILLHDKKISSVRDLLTVLDAV
AKESKPLLIVAEEVEGEALATLVVNNIRGIIKVCAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLSLEKATTSHLGKAKKVRVSKENTTIIDGIGDNDAINGRVKQIKTQIEETTSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVDDALLATRAAVEEGVIPGGGVALI
RAITAISNLKGANEDQTHGIQIALRAMEAPLREIVANAGEEPSVILNKVKEGKDNFGYNA
ATGEFGDMVNLGILDPTKVTRSALQNAASIAGLMITTEAMVAEAPKKDEPTPPAAGGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagaaattattttcagtgaaaaagcccgttcacgtatggtgcacggggtg
aacctgcttgctaatgcagtaaaagccaccttaggtcccaaaggccgccacgtagtgctt
gataagagcttcggctccccaatcattactaaagacggcgtctctgtcgccaaagaaatt
gagctggccgacaagttcgaaaacatgggcgcacaaatgcttaaagaagtcgcgtccaaa
acaaatgaccatgcaggcgacggcaccaccactgccacggtactagcccaggcgttgatc
cgtgaaggatgcaaagcagtggccgctggtatgaatccaatggatcttaagcgtggtatc
gataaagcagtcattgccgcggttaccgaactgaagaagatctccaagccaaccagtgac
gataaagccattgcccaagtcgcaacaatctctgctaactcagacgagtctatcggcaac
attattgccgaagcaatgaagaaggtcggtaaagaaggagtgattactattgaggaaggt
acgactctagaaaacgaattggatgtcgtcgaagggatgcagtttgaccgtggttactct
tcgccatatttcatcaacaaccagcagtcccaaattgttgagctggataatccctacatc
ctccttcacgacaagaaaatttccagtgtgcgcgatttactcaccgtgcttgacgccgtc
gccaaagaaagcaagccgttgctgatcgtcgctgaggaagtcgaaggcgaagctttggca
actctggtcgttaacaacatccgcggcatcatcaaagtctgcgcagtcaaagcacctggc
ttcggtgatcgtcgcaaagccatgctggaagatatggctgtgctgacaggcggcaccgtc
atctcggaagaagtaggtctgtctctggaaaaggccacgaccagccaccttggcaaggcc
aagaaagtacgcgtctctaaagaaaacaccaccattattgatggtatcggtgacaacgat
gcgatcaatggtcgcgtcaagcaaatcaagacccagatcgaggaaaccacctcggactac
gaccgcgaaaaactgcaggaacgtgtagccaagctcgccggtggtgtagccgtcatcaag
gtcggtgctgcaaccgaagtggaaatgaaggaaaagaaagcacgtgttgatgatgcttta
cttgcaacgcgtgcagccgttgaagaaggagtgattccaggcggcggcgtggccctgata
cgtgcaatcactgcaatcagcaatctgaagggtgccaatgaagaccagacacacggcatt
caaatcgcattgcgcgctatggaggcaccattacgcgaaattgttgccaacgccggtgaa
gagccatcggtcatcttaaataaggtgaaagaaggcaaggacaattttggctacaacgcc
gctactggcgaattcggcgatatggtcaaccttggcatcctggaccccaccaaggtcacc
cgttcagcactccagaacgctgcttcaatcgctggcctgatgatcaccacagaagcaatg
gtcgccgaggctccgaagaaagacgagccaaccccacctgctgctggtggcggtatgggc
ggtatgggcggtatggatttctaa
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