Xylella fastidiosa 9a5c: XF_0920
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Entry
XF_0920 CDS
T00033
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xfa
Xylella fastidiosa 9a5c
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xfa03032
]
XF_0920
03400 DNA repair and recombination proteins [BR:
xfa03400
]
XF_0920
Enzymes [BR:
xfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
XF_0920
DNA replication proteins [BR:
xfa03032
]
Prokaryotic type
DNA Topoisomerases
XF_0920
DNA repair and recombination proteins [BR:
xfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XF_0920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AAF83730
UniProt:
Q9PEV8
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Position
complement(884246..886693)
Genome browser
AA seq
815 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPENGFAMRYDLIDKN
EKHVEAITKAAKTADSIYLATDPDREGEAISWHISEILKERGLLKDKPMQRIVFTEITPR
AIKEAIQKPRMIASDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFITREYWSIHAECAHPAQHFSAKLIKLDGQKFEQFTITDSDTAAAAQRRIQQ
VAQGRLHITDVTNKERKRRPAPPFITSTLQQEASRKLGFTTRKTMQIAQKLYEGIALGEE
GSVGLITYMRTDSVNLSLDALSEIRDIIARDYGTNALPDKPNVYTTKSKNAQEAHEAVRP
TSALRTPTQVAPYLSNEEHRLYELVWKRAVASQMIPAILNTTSVDLAAGNEHVFRATGTT
VVVQGFLAVYEEGKDNKNAEDDDEGRKLPVMKTGENVPLERILTEQHFTQPPPRYTEAAL
VKALEEYGIGRPSTYASIIQTLLFRKYVDMEGRSFRPTDIGRAVSKFLASHFTRYVDYDF
TAHLEDELDAISRGEEEWIPLMKKFWVPFKELVEDKKDSLDKTDAGSVRLLGIDPTSGKE
VSGRIGRFGPMVQIGTVDDEEKPRFASLRPNQSIYSISLEEAIELFKMPRVLGEDQSQQV
SVGIGRFGPFAKRGSTYVSLKSEDDPYTIDLARATFLINEKEEIARNRIIKNFENSQIQV
LNGRFGPYISDGKLNGKIPKDREPASLTLEEAQQLLIDTGKPARKNFSTKKTATKNETRK
QTTKKRTTDAKATKKVSDKPVKKQIKKRIAPNITE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacaccttcttatcgtcgaatcgcccgccaaggccaagacgatcaataaatat
ctcggcaaagatttcaccgtcttagcctcttacgggcatgtacgcgatttggtaccgaag
gaaggcgcagtcgatccagaaaacggctttgcgatgcgctacgacctcatcgacaagaac
gaaaagcacgtcgaagcaatcacaaaagcggccaaaacagccgacagcatctatctagca
actgaccctgatcgcgaaggcgaagcgatcagctggcacatctccgagatccttaaagaa
cgtggattattgaaggacaaaccgatgcaacgcatcgtgttcaccgagatcacaccacgc
gcaattaaggaagcgattcaaaagccgcggatgattgccagcgacctggtagacgcccaa
caagcacgccgtgcgctggattacttggttggcttcaacctctcaccagtgctgtggcgc
aaagtacaacgcggtttatcggcagggcgtgtgcaatcgccagcactgcgcatgattgtc
gagcgtgaagaggaaattgaggcattcatcacgcgcgaatattggagcatccatgccgag
tgtgcccatcccgcccaacacttcagcgccaaactcatcaaactggatgggcaaaaattc
gagcaattcactattaccgacagcgacactgccgcagccgcacaacgcaggatccagcag
gtcgcacagggacgcctgcacatcactgacgttaccaacaaagaacggaaacgacgccct
gcaccgcccttcatcacatccacattacagcaagaagcctcacgcaaactcggtttcact
acacgtaaaacgatgcagattgcgcaaaaactttacgaggggatcgcactgggtgaggaa
ggcagcgtcggcctgattacgtatatgcgtaccgactcagtcaacctgtcgctggatgct
ctatcggagatccgcgacatcatcgcacgcgactacggtaccaacgcacttccagacaaa
cctaacgtctacaccaccaaatccaaaaacgcacaagaagcacacgaagcagtacgccca
acttcagcactacgcaccccgacacaggtcgcaccgtatctttctaacgaagaacaccgg
ctatacgaactggtgtggaaacgtgcagtggcctcccaaatgatcccagccatactcaat
accaccagtgtcgatctagccgccggcaacgaacacgtattccgtgccaccggaaccacc
gtcgtagtacaaggtttcctagctgtgtacgaagaaggcaaggacaacaagaacgccgaa
gacgatgacgaaggccgcaaactccccgtaatgaaaaccggggaaaatgttccgctagaa
cgtatcctgaccgaacaacactttacacagccaccaccacgctacaccgaagcagcgttg
gtcaaagctctggaagaatacggcatcggtcgcccatcgacttacgcctccatcatccaa
accctgctatttcgcaaatacgtagacatggaaggtcgcagcttccgcccaacggacatt
ggccgcgccgtctccaaatttctcgccagccacttcacccggtacgtggactacgacttc
accgcacacctggaagatgaattggatgcaatctcacgtggcgaggaagaatggatccca
ctgatgaaaaagttttgggtcccgttcaaagaattggttgaagataaaaaagactccctt
gataaaactgacgctggcagtgtgcgcctgctcggcattgaccccaccagtggcaaagaa
gtcagcggacgcattggccgcttcggaccgatggtgcaaatcggcaccgttgatgatgaa
gaaaaaccaagatttgcctcattacgccccaaccaaagcatctactcaatcagcctcgaa
gaagccatcgaattgttcaaaatgccacgcgtgcttggagaagaccaaagccaacaggtc
agcgtcggcatcggccgctttggaccgtttgccaaacgtggcagcacttatgtttcactg
aaaagcgaagacgatccctacacgattgacttggcgcgcgcgacctttctcatcaacgag
aaagaagaaatcgcgcgtaatcgaatcatcaaaaacttcgaaaacagccagatccaagta
ctgaacggacgcttcggtccctacatcagcgatggcaaacttaacgggaagatccccaag
gatcgcgaaccagcctcactgactctcgaagaagcacagcaattactgatagacactggg
aaaccggcacgcaaaaacttcagtacgaaaaaaactgcaaccaagaacgagacgcgcaaa
caaaccaccaaaaaacgcactacggacgcaaaggcaaccaaaaaagtgtcagataagccc
gtaaagaaacaaatcaaaaaacgcatcgcccccaacattaccgaataa
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