Xylella fastidiosa 9a5c: XF_0967
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Entry
XF_0967 CDS
T00033
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
xfa
Xylella fastidiosa 9a5c
Pathway
xfa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XF_0967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xfa03400
]
XF_0967
DNA repair and recombination proteins [BR:
xfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XF_0967
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XF_0967
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
DUF87
Motif
Other DBs
NCBI-ProteinID:
AAF83777
UniProt:
Q9PER1
LinkDB
All DBs
Position
924533..926542
Genome browser
AA seq
669 aa
AA seq
DB search
MTGLFQLVSSYSPSGDQPTAVQKLVTNFHAGIAKQVLLGVTGSGKTYTIANVVEQIQKPT
LVMAPNKTLAAQLYGEFKAFFPHNAVEYFVSYYDYYQPEAYVPASDTFIEKDSSINEYIE
QMRLAATKALLSRSDVLVVATVSAIYGLGAPEDYLSLRLILSLGEHIEQRQLIRHLTELQ
YTRNELDLVRGSFRVRGEVVDVFPAESEMEALRIELFDGEIESLSLFDPLTGQTVRKLQR
YSVYPKTHYATTRERTLSAVDTIKDELKEYLELLYGRNKLVEAQRLAQRTQFDLEMMAEV
GYCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMFKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEVRSPRSIYVSATPGSYEFRESAGEVIELLVRPTGLID
PEIEIRPVATQVDDLISQINVCIKLGDRVLVTTLTKRMAENLTEYLSEQGIRIRYLHSEI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTSSLIQTIG
RAARSVRGRAILYADKVTRSMRAAIDETERRRQKQKEYNAENGIVPKSVVRPISDILEGA
RDGVEVKSKGKGRRVDEVPADYCALNQAEIAAQMKVLEQQMYQHARDLEFEDAARIRDQI
QRLREAGLG
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtttgtttcagcttgtttcttcatactctccttctggggatcagccgacggct
gtacagaagctagtcactaatttccatgctggcatcgctaagcaggtgttgcttggcgtg
actggttctgggaagacttacaccatcgctaatgtagttgagcagattcagaagccaact
ctggtgatggcgcccaacaagacgttggcagcacagctttacggggaattcaaggcgttc
ttcccgcataatgcggtggaatattttgtcagctactatgactactatcagcctgaggcg
tatgttccagcctcggacacgttcattgaaaaggacagttctatcaatgaatacattgaa
cagatgcgtttggctgcaacgaaggctttgctgtcacgttctgatgtgttggtggtggcg
accgtgtcggcgatttatggtttgggtgcgcctgaagattatctttcgttacgtttgatt
ttgtcgttgggtgagcatattgagcagcggcaattgatcaggcatctcactgagttgcag
tacacacgtaacgagttggatttggtgcgtggtagtttccgtgtgcgtggtgaggttgtt
gatgtattcccggctgagtcagagatggaggcgctgcgcattgagttgtttgatggtgag
atagaaagtttgagcttgttcgatccgcttaccggtcagacggtacgtaagctgcaacgt
tatagtgtttaccctaaaacccactatgcaactacgcgtgaacgtacgctcagtgccgtt
gatacgatcaaggatgagctgaaagagtatctagaacttctgtatgggcggaataagttg
gttgaggcgcaacgtttagctcagcgtactcagttcgacttagagatgatggccgaggtt
ggttattgcaatggtattgaaaattactctcgtcacttaactggtaaggctccgggggaa
cctccaccgacgttgttcgattatctgcctccggatgcgctactggtcattgatgagtcg
cacgtgacaattccgcagatcggtgcgatgttcaagggggaccgttcccgtaaagaaacg
ctggtggaatttggtttccgtttgccatcggcgttagacaatcggccgcttcgctttgag
gaatgggaagtgcgttcgccgcgtagcatttacgtctcggcgaccccagggtcatatgag
ttccgcgagtccgcgggtgaagtcatagagttgttggtgcgtccgaccgggttgattgat
cctgagatagaaatccgtccggttgcgacgcaggtggatgatctgatttcccagatcaat
gtgtgtatcaagttaggtgatcgggttttggtcaccacgttaactaagcgtatggctgag
aacctcactgaatatttgagcgagcagggtatccggatacgttatttgcattcggaaatc
gatacggtggaacgtgtggagatcatccgtgatttgcgtcttggtaaattcgatgtgcta
gttggtatcaaccttctacgtgagggattggacatgccggaggtgtcgttggtggccatt
cttgacgctgataaagaggggtttttgcgttcgaccagttcactgattcagacaattggt
cgtgccgcacgcagtgtgcgcggcagggcaatcttgtatgccgataaagtgactcgttca
atgcgcgctgcaattgatgaaaccgagcgacgtcgacaaaagcagaaggaatacaatgct
gagaacggtattgttccgaaatccgttgtacggcccattagcgacattttggagggtgcg
cgagatggtgtcgaggtgaagagcaaggggaaggggcgcagagttgatgaggttcccgct
gactattgtgcgcttaatcaagctgagattgccgcgcagatgaaagtgctggagcaacag
atgtaccagcatgcgcgtgatttggagtttgaggatgcggcgcgtattcgcgatcaaatt
cagcggcttagggaggctggtctgggttaa
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