Xylella fastidiosa 9a5c: XF_1190
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Entry
XF_1190 CDS
T00033
Name
(GenBank) histone-like protein
KO
K03530
DNA-binding protein HU-beta
Organism
xfa
Xylella fastidiosa 9a5c
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xfa03032
]
XF_1190
03036 Chromosome and associated proteins [BR:
xfa03036
]
XF_1190
03400 DNA repair and recombination proteins [BR:
xfa03400
]
XF_1190
DNA replication proteins [BR:
xfa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
XF_1190
Chromosome and associated proteins [BR:
xfa03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
XF_1190
DNA repair and recombination proteins [BR:
xfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
XF_1190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AAF84000
UniProt:
Q9PE38
LinkDB
All DBs
Position
1142556..1142840
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AA seq
94 aa
AA seq
DB search
MNKTELIDGVAAAANLSKVEAGRAIDAVVNEITEALKKGDSVTLVGFGTFQVRPRAERPG
RNPKSGELIMIAASNNPSFKPGKALKDAVKCSAG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaccgaattgatcgatggtgttgctgctgctgctaatttgtccaaggttgag
gcgggtcgtgccattgatgccgtcgttaatgaaattactgaggccctcaaaaagggtgat
tctgttacgttggtagggttcggtactttccaggtgcgtccgcgtgctgagcgtcctggc
cgcaatccgaagagcggtgaacttatcatgatcgctgcctcaaataacccttcatttaag
cctggtaaagcactaaaagatgccgtaaaatgctccgctggctag
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