Xylella fastidiosa 9a5c: XF_1232
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Entry
XF_1232 CDS
T00033
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
xfa
Xylella fastidiosa 9a5c
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xfa02000
]
XF_1232
Transporters [BR:
xfa02000
]
Other transporters
Pores ion channels [TC:
1
]
XF_1232
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TamB_N
TamB
Motif
Other DBs
NCBI-ProteinID:
AAF84042
UniProt:
Q9PDZ6
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All DBs
Position
1185723..1189262
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AA seq
1179 aa
AA seq
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MDPDIWRLLLLRLRLDVLEMSNASLSLGQSEEPFNFPSWPDVLPSINVPLALQIDTITID
NFRISKLKQPLIHLRRIRGAVNVADGELKIQRLAVDSDRGNIRADGYYRPRQDYSTDLTA
TAVLPSVRGRPPASFGLVIRGDLDRLQLALAGRAPAPLQADVVLNGRSAPRWTFSAASEH
FEPGLLLPGELTRTPSATALAFNMQAQGQGGKADLKGQFKQGEQKIVLQPSRLQLANQML
MVEPLVIDAFGGRTNLRGKVDLRDPANTRFHFSVNARGLSFKPSPEPGNTQVRAVPVVLE
EAGLGVSGTLRAWAAVGRARLTRDAQQARLIFDVRGDAEHATFKQVQAATPGGLLDFTGG
VTWAPALRWDLKAELAQFDPGYFIPGWNGRVSGQLTSQGRQRTVSSGIEAIVAVPGLNGE
LRQRPMQASGRFTFQDHQGEGAFQLGIGDSHISAKGKVGPHLDLAVQLQSLHLNDLLPSK
EGTLKGSLLLRGPAHTPDVIVDLNGTSLRWNDYRAKQFALHGHLPWRGNNGKLTLQAQEL
EIGTLLDSVRIHASGAVENLNLQADVRHAMALLTLHGGVHRDGARWRGDLSQLRIEPAKG
PAWALRAPAQFVMNAPVFTLSATCLDAQGGGALCLHADWPHEGLVLKGQALPLTLVHPWL
PKKNGRSINLRGALTLDGHLRPHGDAWEGSFRASSLEGGIRLGEPRYADVLGVQDRGELV
RYDQFSVQVDLTSQHIVGKLGIGFQGNGFVDAKFNTGWDPYAPLTGDLYMNMSRLYWLEM
FVPDIGNPRGLIEGHVSLRGTRSGPLLGGEATLRDFTAEYPSMGLNLSQGQGRFTAQPDG
SARILASVRSGDGTLNIDGGLSWFGENNPLQLNIRGRNVLAYNTSELRIVSDPDLRFGLI
NNTMQLQGEVAVSEADIDLERLDRGVSVSEDVVVLDPVDPERTAVSPLEMNLRIVLGDKV
NMSGFGLKGGLSGQMQIRARPGHEMTANGGLDVRGRYKAYGQDLTIIRGQLVWSNNIVSD
PRVNIRAQRRIADITAGIDVSGRAQSPRVQVWSDPVMSQSEALSYLVLGRKLGTASSDEN
QQVASAAAALSAGGGLIASQLGAKLGLDDAGISQSSTLGGSVLGFGKYLSPKLYVGYGVS
MVGSGSVLTLKYLLSRGFDLEVESSTVETKGSVNWRKEK
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggacccagatatctggcgactgctcctacttcggttgcgtcttgatgtgttggaaatg
agcaacgccagcctcagcctgggtcagagcgaggaaccgttcaatttcccgagttggccc
gatgtgttgccgtcgatcaacgtgcccttggccttgcagatcgataccatcacgattgat
aactttcgcatttccaaattaaagcaaccactcattcatctgcgccgcatccgcggtgcg
gtcaacgttgctgatggtgaattaaaaatacagcgccttgccgtggacagtgatcgcggc
aatatccgtgccgacggttactaccgcccccgtcaggattactccaccgacttgaccgcc
actgcggtgttgccgagtgtccgtggccggccgcccgccagttttggtttggtgatccgt
ggtgacctggatcgcctgcagctcgcgcttgccggacgtgcccctgcaccattgcaggcc
gatgtggtgctcaacggccgcagcgcccctcgctggacgttcagtgctgccagtgaacac
tttgaacctggattgttgctccctggtgaactgaccaggactccatcagcgacagcgttg
gcatttaacatgcaggcccaggggcaaggtggaaaagctgatctcaagggacagttcaaa
cagggagagcagaagatcgtactgcagccttcgcgcctgcaactggccaatcaaatgttg
atggtcgaaccactggtcattgatgcctttggagggcgcaccaacctgcgtggtaaggtt
gatctgcgcgatcctgctaacacgcgcttccatttttcagtcaacgcccgtggattaagt
ttcaaaccctctcccgagcctgggaacactcaagtccgagccgtgccggttgttctcgaa
gaggcgggattgggagtgtccggcacccttcgtgcctgggcagcagtcggccgtgcacgg
ctgacgcgcgatgcacaacaggcgcgtttgatcttcgatgtccggggggatgctgaacat
gccaccttcaagcaagtccaagcggctacccctggcggtctgcttgacttcactggcggg
gtgacctgggcacctgcattgcgttgggacctgaaggccgaattggcgcagttcgatccg
ggctatttcatccctggttggaatggtcgtgtctccggtcaattgacctctcaaggccga
caacgcactgtatcgtctggcattgaggccatcgtggcagtgccgggactgaacggagaa
ctccggcaacgtcccatgcaagccagcggtcgctttaccttccaagatcatcagggtgag
ggtgccttccaactcggcatcggtgatagccacatcagtgctaaagggaaagtcggaccg
catttggatttggccgtgcagttacagtcactgcatttgaacgacctattgcccagcaaa
gaaggcaccctgaaaggcagcctgctgctcagaggccctgcacacactccagatgtgatt
gtcgatttgaacggcaccagcctgcgttggaatgactatcgtgccaaacagttcgcactg
catggacatttgccgtggcgcggcaacaacggcaagctcaccctgcaagcacaggaactt
gagatcggcaccctgcttgatagtgttcgcatccacgccagtggtgcagttgagaatctg
aatcttcaggccgatgtacgccatgcaatggccctgcttaccctccatggcggcgtccat
cgcgatggtgcgcgctggcgcggcgacctttcacagttgcgtattgaaccagccaagggg
ccagcgtgggcgctgcgtgcaccggcacagtttgtaatgaacgctcctgttttcaccctg
tccgcgacatgtttggatgcacagggcggcggtgccctgtgtctgcatgccgactggcca
catgagggactggtactgaagggccaggcgctcccattgacgttggtgcatccctggcta
cccaagaaaaatggccgctcaatcaacctgcgaggtgcactcacactcgatggtcacctg
agaccgcatggcgatgcctgggaaggcagcttccgcgcgtcctccttggaaggaggcatt
cgcttaggagagccgcgctacgctgacgtgcttggtgtccaagatcgcggtgaattagtc
cgttatgaccaatttagcgtccaagtcgacctgacctcgcagcatatcgttggcaaactc
ggcattgggtttcagggtaacggctttgtcgatgccaagttcaataccggctgggatcct
tatgcgccactgacaggggatctgtatatgaatatgtcgcgcttatattggctggaaatg
tttgtccctgacattggcaatccacgtggcttgattgaaggccatgtcagcttgcgcggt
acacgtagcgggccgctgctcggtggtgaagcgaccctgcgtgatttcactgctgaatac
ccctcaatgggactgaacctcagccagggtcaagggcgcttcaccgcacaacccgatgga
tcggcgcggattctagcctctgtcagatcaggggatggcacattgaatattgatggtggt
ctctcctggttcggagagaacaatccattgcagctcaatattcgaggccgcaacgtcctt
gcctacaacaccagcgaactacgtatcgtgtctgacccggatttgcgatttggcttgatt
aataacaccatgcaactgcaaggtgaggttgcagtgtcggaggctgacatcgatttggag
cgtttagaccgtggcgtctcggtgtctgaggatgtcgtcgtgctcgatccggtagaccca
gagcgtaccgcggtttcaccgctggagatgaacttacgtatcgtccttggcgacaaagtc
aatatgagcggctttggtttgaaaggaggcctttccggacagatgcagatccgcgcgcgt
cctggccatgagatgaccgctaatggtggcctggatgtgcgcggccgctacaaagcttac
ggccaggacttgaccattatacgcggtcaacttgtctggagtaacaatattgtttctgat
ccgcgggtcaacatccgtgcccaacgccgtatagcggatatcactgcagggattgatgtc
agtggccgtgcccaatcgccacgtgttcaggtctggtcggatccagtgatgtcgcaatcc
gaagcgctctcctacttggtgcttggacgtaaactggggactgccagcagcgatgagaac
cagcaagtggcttctgccgccgccgcactatcggctggcggtggtctaattgcctcccaa
cttggcgccaaactcggtctggatgatgccggtatcagccaatccagcactctgggtggc
tctgtcctggggttcggaaaatatctctcccctaaactctatgtaggctacggtgtttcg
atggttggcagtggctccgtgctaacactcaaatacttattaagccgtggctttgatctt
gaggtggaatctagcaccgtcgagaccaaaggctcagtgaattggcgtaaggaaaaataa
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