Xylella fastidiosa 9a5c: XF_1289
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Entry
XF_1289 CDS
T00033
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
xfa
Xylella fastidiosa 9a5c
Pathway
xfa00541
Biosynthesis of various nucleotide sugars
xfa01100
Metabolic pathways
xfa01250
Biosynthesis of nucleotide sugars
Module
xfa_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
XF_1289
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xfa01005
]
XF_1289
Enzymes [BR:
xfa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
XF_1289
Lipopolysaccharide biosynthesis proteins [BR:
xfa01005
]
Lipid A
XF_1289
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AAF84098
UniProt:
Q9PDU0
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All DBs
Position
1241311..1242198
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AA seq
295 aa
AA seq
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MRLSFFSVLLVIPKQSGDVMKLCGFEVGLNQPLFLIAGPCVIESLQLQLDTAGVLKEITS
KLGLNFIFKSSFDKANRTSGSSFRGPGLEEGLKVLEAVKTQIGVPVLTDVHEYTPIDEVA
TVVDVLQTPAFLVRQTDFIRNVCAVGKPVNIKKGQFLSPWDMKPVVEKAKSTGNSQILVC
ERGASFGYNNLVSDMRSLAVMRETGCPVVFDATHSVQLPGAQGGRSGGQREFVPVLARAA
VAVGISGLFAETHPDPPNALSDGPNAWPLHTMAMLLETLVELDAVTKKRGFLEQD
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtttgtcgtttttttctgtgttgctcgtgattcctaaacaatcaggtgatgtgatg
aagctttgtggttttgaagtcggtcttaaccagccacttttcctgattgccggtccttgt
gtgattgagtcgctacagttgcagttagatactgccggtgtactgaaggagatcacttct
aagcttggtttgaactttatctttaagtccagttttgataaggcgaaccgaacttcgggg
agtagttttcgtggccctggtttggaagaaggattgaaggtgttggaggcggtgaagacg
cagattggggtgccagtactgacggatgtgcacgagtacacaccaatagacgaggtagcc
actgttgttgatgtgctgcaaacgccagcgtttttggtacgtcagactgatttcatacgg
aatgtctgtgcggtcggtaaaccggtcaacatcaagaagggacagtttttgtcgccatgg
gatatgaaacctgtggttgagaaagcaaagtcgacgggtaattcgcagattcttgtatgt
gaacgcggcgcttcgttcggttacaacaacttggttagcgatatgcgttcactggcggtg
atgcgcgagaccggctgtccggtggtattcgacgcgactcattctgtgcaacttccgggt
gctcagggtggtcgttccggtgggcaacgcgagttcgtaccggtgttggcgagggcggct
gtggcggtgggtatttccggattgttcgctgagactcacccagacccacccaatgcattg
tctgatggccccaatgcttggccgttgcacacaatggcgatgttgctggaaaccttggtg
gagttggatgcggtcaccaaaaaacgaggtttccttgagcaggattga
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