Xylella fastidiosa 9a5c: XF_1312
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Entry
XF_1312 CDS
T00033
Name
(GenBank) penicillin binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
xfa
Xylella fastidiosa 9a5c
Pathway
xfa00550
Peptidoglycan biosynthesis
xfa01100
Metabolic pathways
xfa01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XF_1312
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
XF_1312
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xfa01011
]
XF_1312
Enzymes [BR:
xfa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
XF_1312
Peptidoglycan biosynthesis and degradation proteins [BR:
xfa01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
XF_1312
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AAF84121
UniProt:
Q9PDR7
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All DBs
Position
1261569..1263653
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AA seq
694 aa
AA seq
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MGVGSDPMSVHHPQAKHTYAEVEQFRRRALLSLFVVVVCLFGLVAWYFKLQVLDHEIYAT
RSDANRIKLHPVVPGRGMIYDRDGRLLADNVPAFRLDVMPDKVADMEVMLVELGKVIPLS
EDELERFHRERKVRRRFMPVTLKLRMSEEEMARFAVDRWRFPGVELEPYFTRRYLYSDLF
AHVIGYVGRIDEKDLETLNGGDAALTYIGKSGLERYYEQVLRGKIGYQQIETNVQGRAIR
SLGRVTAQAGADLRLSIDADLQRAMVAAFGQYEGAAVAMDPRSGEILGMVSLPSYDPNLF
VNGISHAQFNALNANPSRPQFNRLVSGGVAPGSTLKPLIALAGLDTGVRRPEDRILSTGM
FYLPGVNRGWGDSHRGGHGWTDLRKSIAQSVNTYYYKLALDLGIERFTDYMRRYGLGQLT
GVDLTGEISGILPSLEYKRKVRKQAWYQGDTVNVSIGQGDWKVTLLQLVRSVAGLASGHM
NRPHLVVAERTAFSQPWQVLPQPPSQPISPNPGHVQVVREGMIDTMRPGGTGYQAAIGAP
YSIAGKTGTAQVASRKGEAAVDPRNLPMHLRHRALFVGFAPADNPTIAVAVAVEGGGYGA
STAAPIARKIFDAWLLGKLPEGLEPLDSARGRTAIGLTQFDMTVAGVCEAGNRAALQLGE
LQVSVAGGMLNSTAMMPVAPRAPVTLDSLPEEDP
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcggaagtgatccgatgagcgtgcatcatccacaagccaagcatacgtatgcc
gaagttgagcagtttcgccgccgtgctttgctgagcttgtttgttgtagtggtgtgtctg
tttggtttggttgcttggtacttcaaattgcaggtgctcgatcatgagatctatgcgact
cgttctgacgccaatcggatcaaattgcatccagtcgtgccagggcgcggaatgatatat
gaccgggacggacgccttttggcggataacgtgcctgcattccgattggacgtgatgccg
gataaggttgccgacatggaagtaatgcttgttgaactgggaaaggtgatcccgctttca
gaggatgagctggagcgttttcaccgtgagcgtaaggtgcgtcgaagatttatgccggtg
acattgaagctgcgcatgagtgaggaggagatggcgcgttttgcagtggatcggtggcgt
tttcctggtgtggagttggaaccctatttcactcgccgttatctttatagcgacttgttt
gctcacgtgatcggctatgttggtcgtatcgacgaaaaggacttggagacgctgaacggt
ggggatgctgcgttgacctacatcggtaaatcgggcctggagcgctactacgagcaggtg
ttgcgtggcaagatcggttaccagcaaatcgaaacaaatgtgcaaggacgtgcgattcgc
agtctgggacgggtaacggcacaagcgggtgccgacttgcggttgtcgattgacgctgac
ttgcagcgtgcgatggtcgctgcgtttggtcaatatgaaggtgcggcggtggcgatggat
ccacgcagcggggaaattctggggatggtgagtttacccagctacgatcccaatttattt
gttaatggcatttctcatgctcaattcaatgcgcttaatgcgaatccttcgcggccgcag
tttaaccgtttggtctctggcggtgtggctcctggttctacactcaaaccgttgattgcg
ttggctggattggataccggcgtgcgtcggcctgaggaccggattctttccaccggtatg
ttctacctgcccggtgtcaatcggggttggggagattcgcatcgtggtggtcatggttgg
actgatttgcgtaaatcgatcgcacagtcggttaatacttactactataaattagcgttg
gatctgggcattgagcgcttcaccgactacatgcgtcgctatggcctcggtcagctcacc
ggggtcgatttgaccggagagatcagcggtattctcccttccctagaatataagcgtaag
gtgcgtaagcaggcttggtatcagggagatacggtcaatgtttcgattgggcagggagac
tggaaagtgactctgcttcagttagtacgtagcgttgctggcttggccagtggtcacatg
aaccgcccgcacttggtggtggccgagcgtaccgccttcagccagccgtggcaggtgttg
ccgcaaccgccatcacagccaattagcccgaacccggggcatgtgcaggtggtacgtgaa
gggatgatagacaccatgcgtcctggagggaccggctaccaagctgcgattggtgcacct
tattcgattgctggcaaaacaggtactgcccaagttgccagccgtaagggggaggctgcc
gttgatccgcgcaacttaccaatgcatttgcgtcatcgtgcgttattcgttggttttgct
cctgctgataatccgacgattgcggttgcggttgcggtcgagggcggcgggtatggtgct
agcactgctgcacccattgcacgcaagatttttgatgcttggttgctaggcaagttgcca
gagggcttggagcctttggacagtgcgcgaggtcgtaccgcgattggtttgactcagttt
gatatgactgttgccggggtatgcgaagctggaaaccgtgctgccttgcaactgggagaa
ctacaggtttcggttgctggtggaatgctaaattcaaccgccatgatgccggttgcgcca
cgtgcgccagtgactctcgactcattgccggaggaagacccttga
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