Xylella fastidiosa 9a5c: XF_1502
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Entry
XF_1502 CDS
T00033
Name
(GenBank) RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
xfa
Xylella fastidiosa 9a5c
Pathway
xfa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
XF_1502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xfa03021
]
XF_1502
03400 DNA repair and recombination proteins [BR:
xfa03400
]
XF_1502
Enzymes [BR:
xfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
XF_1502
Transcription machinery [BR:
xfa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
XF_1502
DNA repair and recombination proteins [BR:
xfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
XF_1502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AAF84311
UniProt:
Q9PD77
LinkDB
All DBs
Position
complement(1453924..1454223)
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AA seq
99 aa
AA seq
DB search
MARITVEDCLEVVNNRFELVMMASKRARQLANGVPPLIENTNSEDKPTVLALREIAARKI
DSKMIDEIEKAERERTEREAMEWAAAEVVADEDMSKSDD
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtatcactgttgaggattgcctggaagttgttaacaaccgtttcgaactggtc
atgatggcatccaaacgtgcccgtcagctcgctaacggtgtaccgccgctcattgaaaat
accaatagcgaagataagcccaccgtactggcattacgtgaaattgctgcacgcaagatc
gatagtaagatgatcgacgagatcgagaaggcagaacgcgagcgaactgaacgtgaagct
atggagtgggccgccgctgaagtcgtcgctgacgaagatatgtctaaaagcgacgattga
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