Xylella fastidiosa 9a5c: XF_1888
Help
Entry
XF_1888 CDS
T00033
Name
(GenBank) thiamine biosynthesis protein
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
xfa
Xylella fastidiosa 9a5c
Pathway
xfa00730
Thiamine metabolism
xfa01100
Metabolic pathways
xfa01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
XF_1888
Enzymes [BR:
xfa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
XF_1888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
PTE
Motif
Other DBs
NCBI-ProteinID:
AAF84694
UniProt:
Q9PC93
LinkDB
All DBs
Position
1794839..1796728
Genome browser
AA seq
629 aa
AA seq
DB search
MDRAARPPWQRRKVPRRRFVPSLSGRTIVNITTALPLPTHLLSEKVTAPLLGARKIYITG
SRQDIRVPMREIALTPSSARYGGNENLSLALYDTSGIYTDPQATIDLACGLPRLRAAWID
ERADTVEAALYFKVPESVSVTAPPFPTAPRPRRARDNVAVTQLEYARRGLVTPEMEFVAI
REQQRREQTVENLRGQRHAGDAWGALVGTPITPEFVRDEIARGRAILPNNINHPESEPMI
IGRNFLTKINANIGTSALSSSIAEEVEKLVWAIRWGADTIMDLSTGRDIHATREWILRNS
PVPVGTVPIYQALEKVGGHVEALSWAVFRDTLIEQAEQGVDYVTVHAGVLRDFIPLTASR
LTGIVSRGGSIMARWCQAHRSENFLYTHFEELCEIMRAYDVAFSLGDGLRPGCIADANDA
AQFAELEILGELTHIAWNHQVQVMVEGPGHVPMHLIKANMDKQLAACGEAPFYTLGPLTT
DIAPGYDHITSAIGAAMIGWYGTAMLCYVTPKEHLGLPNLQDVHDGIIAYKIAAHAADLA
KGHPAAQARDDALSKARFEFRWQDQFHLSLDPEKALALHDESLPKEAHKRAAFCSMCGPQ
FCSMKISQEVRDASSNELSDGNTNTNDAI
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
gtggaccgcgccgcacggccaccctggcagaggcgtaaggtgccgcgccgccgcttcgtc
ccgtcactctctggacgaaccatcgtgaacatcaccactgccctcccccttcccacccac
ttgctgtcggagaaggtgactgcacctttacttggcgcacgcaaaatttacattaccgga
tcacgccaagatatacgtgtgccaatgcgcgagatcgcactcacacccagctcagctcga
tacggcggaaacgagaatctatcactggcgctctatgacacttcggggatttacactgat
ccgcaagctacgattgacttggcgtgtggtctacctcgattacgcgctgcttggattgat
gagcgtgccgataccgtagaagctgcgttgtatttcaaagtacctgagtcggtatctgtc
accgcaccgcctttccctacagcgccacggccacggcgtgcacgtgacaatgtcgcggta
acgcaactggaatatgcacgacgtggcctcgtcactccagaaatggagtttgtcgctatc
cgtgaacaacaacgccgtgaacaaactgtcgaaaatcttcgtggacagcgccatgcaggt
gatgcctggggggctttggttggcacacccatcactcctgaattcgtacgtgatgagatc
gcacgtggccgcgcgattcttcctaataacatcaaccatcctgaaagcgagccaatgatt
attggccgcaactttttgacaaaaatcaatgccaatattggaacatcagccctgtcttcc
agcattgccgaagaagtggagaagctggtttgggcgatccgctggggcgcagacacaatc
atggacctgtctactggccgtgacatccatgctactcgagaatggattctgcgtaattca
cctgtgcctgtggggacggtgccaatttatcaagcgttggagaaagtcggcggacatgtt
gaagctctgagttgggccgtgtttcgtgacactttgatcgaacaggccgaacaaggtgtg
gactatgtcaccgtgcatgcaggagtcctccgagactttatccccctgactgcttcacgt
ttaacaggcatcgtctcgcgtggtggctccatcatggctagatggtgtcaggcacaccgc
agcgaaaacttcctatacacgcatttcgaggaactttgtgaaatcatgcgtgcctacgac
gtggcattttctcttggtgatggattgcgcccaggctgcatcgctgatgcgaacgatgca
gctcaatttgccgaattggagattcttggcgagttgacccatatcgcctggaatcaccaa
gtacaggtgatggtagaaggtcctggacacgtcccaatgcatctaatcaaggccaatatg
gataagcaattagccgcctgtggtgaggcacctttctacacgctaggtccattaactaca
gatatcgccccaggttacgaccacattactagtgcaattggcgcggcaatgatcggctgg
tatgggacggcgatgctatgttacgtgactcccaaggagcaccttggcctgcctaatttg
caagatgtccatgatggcattatcgcctacaaaattgcggcacatgcggctgatcttgcc
aaagggcatccagcggcacaggcacgtgacgatgcactctctaaagcacgctttgaattc
cgctggcaagatcaattccatctcagcttggatccagaaaaagcactggcactgcatgat
gagagcctccctaaagaagcgcataaacgagcagcattctgttcgatgtgcggaccgcaa
ttctgttcaatgaaaatctctcaagaggtccgtgacgcttcctctaacgaattgtcagat
ggaaatacgaataccaacgacgctatctag
DBGET
integrated database retrieval system