Xylella fastidiosa 9a5c: XF_1904
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Entry
XF_1904 CDS
T00033
Name
(GenBank) holliday junction binding protein, DNA helicase
KO
K03550
holliday junction DNA helicase RuvA
Organism
xfa
Xylella fastidiosa 9a5c
Pathway
xfa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XF_1904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xfa03400
]
XF_1904
DNA repair and recombination proteins [BR:
xfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XF_1904
RecFOR pathway proteins
XF_1904
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
RecR_HhH
HHH
Transposase_20
IMS_HHH
DUF6303
Motif
Other DBs
NCBI-ProteinID:
AAF84710
UniProt:
Q9PC77
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Position
complement(1811385..1811969)
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AA seq
194 aa
AA seq
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MIGRLRGVLTSKTPPWLVVDVCGVGYELEVPMSTFYELPNVGYEVNLFTHYTQKDDSAAL
YGFLSESERRLFRHLQRVSGIGTKIALAVLSSVSVDTFAGLIQAGDVNALTVIPGIGKKT
AERMLVELRDRAADFNNGISTSGKLNLDTVSEAALALQQLGYKPAEAARMARDAGTESDD
VASVIKKALQAALR
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgattggtcgcttacgaggggttttgactagcaaaacgccaccgtggctcgtggttgat
gtgtgtggagttggctacgaactagaggtgccgatgagcactttttacgaattgccaaac
gtcggttacgaggtgaatttgtttactcactatacgcagaaggatgatagtgccgcgttg
tacggttttctgagcgaaagtgagcggcggctattccgccacctgcagcgggtgagtggt
atcggtaccaagatcgctttggcggttctgtccagcgtcagcgtggatacatttgcgggg
ttaatccaggctggtgacgttaatgcattaacggttatcccaggaattgggaagaaaact
gctgaacgtatgctggtggagttgagagaccgtgctgcagacttcaacaatggtatttcc
acctcaggcaagctcaatcttgatacggtgtctgaagctgccttggctttgcagcaactc
ggttacaagccagctgaggctgcacgtatggcacgtgatgctggtactgagagcgatgat
gttgctagtgtcatcaaaaaagcgcttcaagccgcgttacgctga
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