Xylella fastidiosa 9a5c: XF_2157
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Entry
XF_2157 CDS
T00033
Name
(GenBank) DNA polymerase III, epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
xfa
Xylella fastidiosa 9a5c
Pathway
xfa03030
DNA replication
xfa03430
Mismatch repair
xfa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XF_2157
03430 Mismatch repair
XF_2157
03440 Homologous recombination
XF_2157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xfa03032
]
XF_2157
03400 DNA repair and recombination proteins [BR:
xfa03400
]
XF_2157
Enzymes [BR:
xfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XF_2157
DNA replication proteins [BR:
xfa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XF_2157
DNA repair and recombination proteins [BR:
xfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XF_2157
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AAF84956
UniProt:
Q9PBI7
LinkDB
All DBs
Position
complement(2047997..2048716)
Genome browser
AA seq
239 aa
AA seq
DB search
MRNKKRQIVLDTETTGLEWSKGNRIVEIGAVELLDRRLSGDKFHRYLKPDVSFESGAQEV
TGLTMEFLADKPEFSMIADEFLAYINGAELIIHNAAFDLGFLDYELSRLGSQYGKITDRA
SVLDTLVMARERYPGQRNSLDALCKRLGVDNAHRQLHGALLDAQILADVYIALTSGQEEI
GFALPESSRGGVDAASVAFMPDVLLTRPCVVVSQSELEAHEARLAKLRKIAGHVLWDAI
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaggaataagaagcgtcagattgttcttgatactgagaccactggcctggaatggagc
aaggggaaccgcattgtggagatcggtgcggtcgaactgcttgatcgccggctcagtggg
gacaaatttcatcgttatctcaagcctgatgtgtcgtttgagtccggtgcccaggaggta
acggggctgacgatggagtttctagcggacaagccagagttcagcatgattgccgatgag
tttttggcttatatcaatggtgccgaactgattattcacaatgcggcgttcgatctggga
ttccttgattacgagttatcgcggttgggttcgcagtacgggaaaatcacagatcgtgcc
agcgtacttgatactttggtgatggctcgggagcgttatccgggtcagcgtaattcactg
gatgcattatgtaagcgtcttggtgtggataatgcccaccgtcagttacatggtgcatta
cttgacgcgcagatattggccgatgtttatatcgcgttgacctctggacaagaggagatt
ggttttgcgttgcctgagagcagccgtggtggtgtcgatgccgctagcgtggcatttatg
ccggatgtgttgttaacacgtccatgtgtggtggtgtcgcaatccgaactggaagcgcat
gaggcgcgtttggccaagttgcgtaagatcgctggtcatgtgctgtgggatgcgatatag
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