Xylella fastidiosa 9a5c: XF_2178
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Entry
XF_2178 CDS
T00033
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
xfa
Xylella fastidiosa 9a5c
Pathway
xfa03030
DNA replication
xfa03430
Mismatch repair
xfa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XF_2178
03430 Mismatch repair
XF_2178
03440 Homologous recombination
XF_2178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xfa03032
]
XF_2178
03400 DNA repair and recombination proteins [BR:
xfa03400
]
XF_2178
Enzymes [BR:
xfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XF_2178
DNA replication proteins [BR:
xfa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XF_2178
DNA repair and recombination proteins [BR:
xfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XF_2178
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AAF84977
UniProt:
Q9PBG6
LinkDB
All DBs
Position
2064927..2065958
Genome browser
AA seq
343 aa
AA seq
DB search
MELRPEQLANLPANQPLEPAYLIAGPETLRLVEAADAIRTHARADGITEREIFDVESRDF
DWQQLASSFNAPSLFSSRRLIEIRLPGGKPGKEGSEVITRFCATPSSDVILLITCNEWSK
AHHGKWTDAIARIGKIAIAWTIKPHELPDWITRRLHSKGLRANTDVIHQLSTRLEGNLLA
AAQEIDKLALLNQGPLLDLETMESFVADTARYDVFRLTEAMLSGQPTATIRMLGKLRAEG
EAVAALLPILTKELIRTTTLSWVKHDNGNLAAEMKAQGIWETRQAPFKRALQRHTSPYKW
EHFVAEVGRIDRITKGRNDGNAWLSLERLMVAVAEADATRLLA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcgcccagagcaactcgccaacctgcctgccaatcaacccttagagcctgcc
tacctcattgccggccccgaaaccctacgcttagtcgaagctgccgatgcgatacgtacc
catgctcgtgccgacggcatcaccgaacgcgaaatattcgacgtcgaaagccgtgacttc
gactggcaacaacttgcctccagcttcaacgcccccagcctcttcagctcacgtcgctta
atcgaaatacgcctcccaggaggtaaacctggtaaagaaggcagtgaagtcatcacaagg
ttctgcgccaccccctcatcagatgttatcttgctgatcacctgcaacgaatggagcaaa
gcacaccatggcaagtggaccgatgccatcgctcgcatcggtaaaatcgcaatcgcctgg
accatcaagcctcacgaactacccgactggattacacgccgcctacatagcaaaggctta
cgtgccaacacagatgtgatacaccaattaagcacacgcctagaaggcaacctactcgcc
gccgcccaagaaattgacaaattggcgttattgaaccaaggccctctcctcgacctagag
accatggaatcctttgttgccgacacagcgcgttacgacgtattccgactgaccgaagcg
atgctctccggccaacccaccgcaacgatacgcatgctcggcaaactgcgggccgaaggt
gaagcagtggcagcactgctgcccattctgaccaaagaactcatccgtaccacgaccctg
tcatgggtcaaacatgacaacggcaatctagctgccgaaatgaaagcccagggcatctgg
gaaacacgtcaagcaccgttcaagcgcgcattacaacgtcatacctcaccgtacaaatgg
gaacacttcgttgccgaagtcgggcgcatagaccgcatcaccaaaggacgcaacgacggc
aatgcatggctatcactcgaacgcctcatggtggcagtggcagaagcagatgcaacacgt
ctgctagcataa
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