KEGG   Xylella fastidiosa 9a5c: XF_2246
Entry
XF_2246           CDS       T00033                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
xfa  Xylella fastidiosa 9a5c
Pathway
xfa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:xfa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    XF_2246
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xfa03019]
    XF_2246
   03009 Ribosome biogenesis [BR:xfa03009]
    XF_2246
   03036 Chromosome and associated proteins [BR:xfa03036]
    XF_2246
Enzymes [BR:xfa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     XF_2246
Messenger RNA biogenesis [BR:xfa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     XF_2246
Ribosome biogenesis [BR:xfa03009]
 Eukaryotic type
  90S particles
   RNase
    XF_2246
 Prokaryotic type
  rRNA processing factors
   XF_2246
Chromosome and associated proteins [BR:xfa03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     XF_2246
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: AAF85045
UniProt: Q9PB98
LinkDB
Position
2136468..2137106
AA seq 212 aa
MFTDPSLLLQALRHCSAGTPHNERLEFLGDSVVNLLIAEALFQRWPRADEGALTRARSEL
VRETSLASIARTMQLGEQLILGPGELKSGGHRRDSILADAVEAVIAAIYLDADLATCRTV
VLPWFETALTALPVGKPEKDPKTRLQEWLQARQWSLPVYELIFESGDPHTKHFRVSCTLG
ELKLRTEGEGSSRRLAEQDAASHAIDQLDSNK
NT seq 639 nt   +upstreamnt  +downstreamnt
gtgtttaccgatccatctctgctactgcaagcactgcgtcactgtagtgccggcaccccg
cacaatgagcgcctggagttcctcggcgacagcgtggttaacttgctgatcgccgaagcg
cttttccaacgctggccacgtgctgacgaaggagcattaacccgtgcccgttccgaactg
gtgcgtgaaacatctctggcctcgattgcacgcaccatgcaattaggggagcaactcatc
cttggaccaggtgaactcaaatctggaggacaccgccgcgactccatcctcgccgatgca
gtagaagcagtgattgcagccatttatctcgacgccgatttagcaacgtgccgtactgtg
gtgttaccgtggtttgaaacagcactcaccgcattgcctgttggtaaacccgaaaaagac
ccgaaaactcgactccaagaatggctacaagcacgccagtggtcattacccgtgtatgaa
ttgatcttcgagagcggtgatcctcataccaagcacttccgagtgagttgcactctgggt
gaactaaaactacgcaccgaaggcgaaggcagctcacgccgtctcgccgaacaagacgct
gcctctcacgccatcgaccaactggattcaaacaagtga

DBGET integrated database retrieval system