Xylella fastidiosa 9a5c: XF_2246
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Entry
XF_2246 CDS
T00033
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
xfa
Xylella fastidiosa 9a5c
Pathway
xfa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
XF_2246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xfa03019
]
XF_2246
03009 Ribosome biogenesis [BR:
xfa03009
]
XF_2246
03036 Chromosome and associated proteins [BR:
xfa03036
]
XF_2246
Enzymes [BR:
xfa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
XF_2246
Messenger RNA biogenesis [BR:
xfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XF_2246
Ribosome biogenesis [BR:
xfa03009
]
Eukaryotic type
90S particles
RNase
XF_2246
Prokaryotic type
rRNA processing factors
XF_2246
Chromosome and associated proteins [BR:
xfa03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
XF_2246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AAF85045
UniProt:
Q9PB98
LinkDB
All DBs
Position
2136468..2137106
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AA seq
212 aa
AA seq
DB search
MFTDPSLLLQALRHCSAGTPHNERLEFLGDSVVNLLIAEALFQRWPRADEGALTRARSEL
VRETSLASIARTMQLGEQLILGPGELKSGGHRRDSILADAVEAVIAAIYLDADLATCRTV
VLPWFETALTALPVGKPEKDPKTRLQEWLQARQWSLPVYELIFESGDPHTKHFRVSCTLG
ELKLRTEGEGSSRRLAEQDAASHAIDQLDSNK
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaccgatccatctctgctactgcaagcactgcgtcactgtagtgccggcaccccg
cacaatgagcgcctggagttcctcggcgacagcgtggttaacttgctgatcgccgaagcg
cttttccaacgctggccacgtgctgacgaaggagcattaacccgtgcccgttccgaactg
gtgcgtgaaacatctctggcctcgattgcacgcaccatgcaattaggggagcaactcatc
cttggaccaggtgaactcaaatctggaggacaccgccgcgactccatcctcgccgatgca
gtagaagcagtgattgcagccatttatctcgacgccgatttagcaacgtgccgtactgtg
gtgttaccgtggtttgaaacagcactcaccgcattgcctgttggtaaacccgaaaaagac
ccgaaaactcgactccaagaatggctacaagcacgccagtggtcattacccgtgtatgaa
ttgatcttcgagagcggtgatcctcataccaagcacttccgagtgagttgcactctgggt
gaactaaaactacgcaccgaaggcgaaggcagctcacgccgtctcgccgaacaagacgct
gcctctcacgccatcgaccaactggattcaaacaagtga
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