Xylella fastidiosa 9a5c: XF_2407
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Entry
XF_2407 CDS
T00033
Name
(GenBank) bacteriocin
Organism
xfa
Xylella fastidiosa 9a5c
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HCBP_related
HemolysinCabind
RTX_C
BapA_N
Motif
Other DBs
NCBI-ProteinID:
AAF85206
UniProt:
Q9PAT8
LinkDB
All DBs
Position
2279024..2285218
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AA seq
2064 aa
AA seq
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MMTSLDFYFDQATLDRANTYRNAGNYPAMYQTLSDAVTAGGGDTKLVNWLTLAGEINSGR
RENFYADFVRGAVYHAGSEAGIPIDAALFQHVSDLLARNVMNDALQNKMLSFDRVISRDV
AAASEPVGAGGLGLAMDKWGGTVGGAFPISVGGLGMDPNSAFYQNLEKFYRDNGYTPGDR
AARLFDLLDDSFFGLIEVAKNPIAINDLANRITVNTLTRFAIITQRQLDVANIFSGLQGD
ATQSGSLSEIVWDNGRNTVTNAGIMLFPVSPLAGVGMQMGINMGMAVAPLVGDVFSGATA
TWNRWMQPLFDQLLDMVRDSIQHGADAVRQTLHDWWTHIGDAFHRLGEKLHKDSESFTDL
LHDLFDQSRDYVTPCDPLALDLDGDGIETVAPGKHILFDHDGDGIKHASGWVKSDDGLLV
LDRNGNGRIDNGNELFGTETVLSNGRKAASGFEALRDLDSNADGVFSAADRRFNEVRVWR
DLNQDGQSQANELFTLSSLGIASITLTPTTTPPISMPLGNGNFVGASGIYTRTDGRTGGI
NDLQLGISRFYRDNSGAQEQVTVSAAARALPTLKGSGAVRDLQEAASLSPALLAAVQALL
SGTTQGTMRAALDQVIALWASTSTMLSTEERLEASGNSNRTVYYHGWVPGSVTSQGEAAV
QTWIQQQHARLGPIIGILEKFNGSNLVRYNNDAVSTDINVFHWYHDTMSIRLVDQRQIDP
LIEAYAKLKESIYIRLVLEPRLTDYLSGLRLTYNNGVMAWDASGLEAKLDHTWQHNKAQA
LQDVMDLYRYSSDALAPSGWNPLNGLRQMIDKTAATPDGRQALADAGIPLIAGNAEGSDA
ADLLFGDAGANLLRGGGGDDVLSGGDGDDTLYGGDGNDILHGDAGNDTLYGGGGNDLLLG
GDGDDVLDGGEGSNRLEGGAGNDVLKVAYRSADNVLIGGTGDDTLYGSGYADTYLFNKGD
GHDTIIEKSGDDTLVFGEGIVASQVRVLREGQDVVLDLGNGHDSIRLKDWLDSNGYRNGN
NDIEQIVFADGTIWTPETLSSMGLTTLGTSGNDTLKGWQGKDILLGGDGDDVLDGGMGSN
RLEGGAGNDVLKVAYRSADNVLIGGTGDDTLYGSAYADTYLFNKGDGHDTIIEQSGDDTL
VFGAGIVASQVRVLREGQDVVLDLGNGHDSIRLKDWLTSDGYRNGNNDIEQIVFADGTIW
TPETLSSMGLTTLGTSGNDTLKGWQGKDILLGGDGDDVLDGGMGSNRLEGGAGNDVLKVA
YRSADNVLIGGTGDDTLYGSAYADTYLFNKGDGHDTIIEQSGDDTLVFGAGIVASQVRVL
REGQDVVLDLGNGHDSIRLKDWLTSDGYRNGNNDIEQIVFADGTIWTPETLSSMGLTTLG
TSGNDTLKGWQGKDILLGGDGDDVLDGGMGSNRLEGGAGNDVLKVAYRSADNVLIGGTGD
DTLYGSAYADTYLFNKGDGHDTIIEQSGDDTLVFGAGIVASQVRVLREGQDVVLDLGNGH
DSIRLKDWLTSDGYRNGNNDIEQIVFADGTIWTPETLSSMGLTTLGTSGNDTLKGWQGKD
ILLGGDGDDVLDGGMGSNRLEGGAGNDVLKVAYRSADNVLIGGTGDDTLYGSAYADTYLF
NKGDGHDTIIEQGGDDTLVFGAGIVASQVRVLREGQDVVLDLGNGHDSIRLKDWLTSDGY
RNGNNDIEQIVFADGTIWTPETLSSMGLTTLGTSGNDTLKGWQGKDILLGGDGDDVLDGG
MGSNRLEGGAGNDVLKVAYRSADNVLIGGTGDDTLYGSGYADTYLFNKGDGHDTIIEQGG
DDTLVFGAGIVASQVRVLREGQDVVLDLGNGHDSIRLKDWLTSDGYRNGNNDIEQIVFAD
GTIWTPETLSSMGLTTLGTSGNDTLKGWQGKDILLGGDGDDVLDGGMGSNRLEGGAGNDV
LKVAYRSADNVLIGGTGDDTLYGSAYADTYLFNKGDGHDTIIEQGGDDTLVFGAGLHQKE
ARFTKSGNDLSILFNASEDQVTIAGWFNGSGHQVESLVFQDGTVLSGEVERLIAAMALSS
AVTTTQASVRDTKESHRLVASSIV
NT seq
6195 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaagtttagatttttattttgatcaagccacgttggaccgtgccaacacctat
agaaatgccgggaactatccggcgatgtaccagacattgtccgatgccgtcaccgccggc
ggtggcgataccaaattggtgaattggctgacacttgccggggagattaattcagggcga
agggaaaatttctacgcagactttgtgcgcggcgcggtgtatcacgcgggcagtgaggcg
ggtatacctattgatgcggcgctgtttcagcacgtctccgacttgcttgcaaggaatgta
atgaatgatgccttacaaaataaaatgctttctttcgacagagtcatttcaagagacgtg
gcggccgcctcagaaccagtaggagcaggcggattggggctggcgatggataaatggggc
gggacggtgggcggcgcgttcccaatctctgtgggtgggcttgggatggaccccaattcc
gcgttttatcaaaatcttgaaaaattctatcgggacaatggatatacccctggtgatcgg
gctgccagactcttcgatttgttggatgactctttcttcggcctgattgaggtggctaaa
aatccgatcgccatcaatgatcttgcaaacagaattacggtcaatacgctcactcgattc
gccatcatcacgcaacgtcaattagatgttgcgaatatattttctgggttacaaggtgat
gccacgcagagcggcagcctgtcagaaattgtctgggacaatggccgcaataccgtcaca
aacgcaggaatcatgttattcccggtctcgcctttggctggggtcggtatgcagatgggc
atcaatatggggatggccgttgctcccttggtgggtgatgttttctccggggcaacagcc
acctggaaccgttggatgcaaccgctgtttgatcaactgctagatatggtccgcgacagc
atccaacatggcgccgatgcggtgcggcaaacgctgcatgactggtggacccatatcggc
gatgccttccaccgcctgggcgagaagttgcacaaagacagcgagtccttcacagatctg
ctgcatgacttgtttgaccaaagccgtgattacgtgacgccctgcgacccactggcgctg
gacctggacggcgacggtattgaaacggtggcccctggtaaacacattctgtttgatcac
gacggcgacggcatcaaacacgccagcggttgggtgaagtccgatgatggtttattggtg
ctggaccgcaacggcaacgggcgtattgataacggcaacgaactgtttggtacagaaacc
gtcttgtcaaacggacgtaaggcggcctctggctttgaggcgctgcgtgatttagatagc
aacgccgatggcgtcttcagtgctgccgatcgccgttttaacgaggtgcgcgtgtggcgc
gatctcaatcaagatggccagtcccaggccaacgaactgttcaccctctccagcctgggc
attgcctccatcaccctcacgcccaccaccaccccgccaatctccatgccactgggcaac
ggcaactttgtcggtgccagcggtatctacacccgcaccgatggccgcactggtggcatt
aacgacctgcaattaggcatcagtcgcttctatcgcgataacagcggcgcccaggagcag
gtgacggtgagcgctgccgctcgtgccttgccaacgctcaaaggcagcggcgcagtgcgc
gatctgcaagaggccgccagcctgtcgcccgcgttactggcggcagtgcaagcgctgttg
tccggcaccacccagggcacaatgcgcgcggcgctggatcaggtgatcgccttgtgggcc
agcacctcgaccatgctgagcactgaggaacgcctggaagcgtccgggaacagcaaccgc
acggtgtattaccacggctgggtccccgggagcgtaacctcccagggcgaggcggcagtg
caaacctggatacaacagcagcacgcccggcttgggccaatcatcggcattttggagaaa
ttcaacggctccaacctggtcagatataacaacgatgcagtgagcacggacatcaatgtc
ttccactggtaccacgatacgatgagtatccgactggtggatcagaggcagattgatcca
ctgattgaggcctacgccaagcttaaagaatcgatctatatccgcctggtgctggagcca
cggctcactgattacctgtccggactccgcctgacctacaacaacggcgtgatggcatgg
gatgcctccggcctggaggccaagctagatcacacctggcagcacaacaaagctcaggcg
ctacaggatgtgatggacctataccgctacagcagcgatgctctggcccccagcggttgg
aatccgctgaatggcttacgccagatgattgataagactgcggcaacccccgatggaagg
caggccctggccgatgcgggcattcccctgattgccggaaatgccgaaggcagtgacgcc
gcagatctgctgtttggcgatgcgggcgccaatctcctgcggggcggcggcggggatgat
gtgctctccggtggtgatggagacgacacactgtacggtggcgatggcaacgacatcctc
cacggtgatgccggtaacgacactctctacggtggcggcggcaatgatctgctgctgggt
ggagatggcgatgacgtcctagacggcggcgaaggcagcaaccgtcttgagggtggtgct
ggtaacgatgtcctgaaagtggcgtatcggtccgcagataacgtgctgatcggcggtacc
ggcgatgacacgttgtatggcagcggttacgcggacacgtatctgttcaacaaaggagac
ggccacgacacgatcattgagaaaagcggtgatgacacactcgtctttggtgaggggatt
gttgctagccaggtacgggtgctgcgcgaagggcaagatgtggtgctggacctgggcaac
ggccacgacagcatccgtttgaaggactggttggattccaacggttaccgcaacggcaac
aatgacattgaacagatcgtctttgccgacggcacgatctggactccagagaccttgagc
agcatgggcctcaccacactgggcacctcgggtaatgacaccctcaagggctggcaaggc
aaggatattctgctgggtggagatggcgatgacgtgttggacggcggcatgggcagcaac
cgcctggaaggcggcgccggtaacgatgtcctgaaggtggcgtatcggtccgcagataac
gtgctgatcggcggtaccggcgatgacacgttgtatggcagcgcttacgcggacacctat
ctattcaacaagggagacggccacgacacgatcattgagcaaagcggtgatgacacactc
gtctttggtgcggggattgttgctagccaggtacgggtgctgcgcgaagggcaagatgtg
gtgctggacctgggcaacggccacgacagcatccgtttgaaggactggttgacttccgac
ggttaccgcaacggcaacaatgacattgaacagattgtctttgccgacggcaccatctgg
actccagagaccttaagcagcatgggcctgacgacgctaggcacctccggcaatgacacg
ctcaagggctggcaaggcaaggatattctgctgggtggagatggcgatgacgtgctggat
ggtggcatgggcagcaaccgcctggaaggcggcgccggtaacgatgtcctgaaggtggcg
tatcggtccgcagataacgtgctgatcggcggtaccggcgatgacacgttgtatggcagc
gcttacgcggacacctatctattcaacaagggagacggccacgacacgatcattgagcaa
agcggtgatgacacactcgtctttggtgcggggattgttgctagccaggtacgggtgctg
cgcgaagggcaagatgtggtgctggacctgggcaacggccacgacagcatccgtttgaag
gactggttgacttccgacggttaccgcaacggcaacaatgacattgaacagattgtcttt
gccgacggcaccatctggactccagagaccttaagcagcatgggcctgacgacgctaggc
acctccggcaatgacacgctcaagggctggcaaggcaaggatattctgctgggcggagat
ggcgatgacgtgctggatggtggcatgggcagcaaccgcctggaaggcggcgccggtaac
gatgtcctgaaggtggcgtatcggtccgcagataacgtgctgatcggcggtaccggcgat
gacacgttgtatggcagcgcttacgcggacacctatctattcaacaagggagacggccac
gacacgatcattgagcaaagcggtgatgacacactcgtctttggtgcggggattgttgct
agccaggtacgggtgctgcgcgaagggcaagatgtggtgctggacctgggcaacggccac
gacagcatccgtttgaaggactggttgacttccgacggttaccgcaacggcaacaatgac
attgaacagattgtctttgccgacggcaccatctggactccagagaccttaagcagcatg
ggcctgacgacgctaggcacctccggcaatgacacgctcaagggctggcaaggcaaggat
attctgctgggcggagatggcgatgacgtgctggatggtggcatgggcagcaaccgtctg
gaaggcggcgccggtaacgatgtcctgaaagtggcgtatcggtccgcagataacgtgctg
atcggtggtaccggcgatgacacgttgtatggcagcgcttacgcggacacctatctattc
aacaagggagacggccacgacacgatcattgagcaaggcggtgatgacacactcgtcttt
ggtgcggggattgttgctagccaggtacgggtgctgcgcgaagggcaagatgtggtgctg
gacctgggcaacggccacgacagcatccgtttgaaggactggttgacttccgacggttac
cgcaacggcaacaatgacattgaacagatcgtctttgccgacggcaccatctggactcca
gagaccttaagcagcatgggcctcaccacgctgggcacctcgggtaatgacaccctcaag
ggctggcaaggcaaggatattctgctgggcggagatggcgatgacgtgctggatggtggc
atgggcagcaaccgtctggaaggcggcgccggtaacgatgtcctgaaagtggcgtatcgg
tccgcagataacgtgctgatcggtggtaccggcgatgacacgttatatggcagcggttac
gcggacacgtatctgttcaacaaaggagacggccacgacacgatcattgagcaaggcggt
gatgacacactcgtctttggtgcggggattgttgctagccaggtacgggtgctgcgcgaa
gggcaagatgtggtgctggacctgggcaacggccacgacagcatccgtttgaaggactgg
ttgacttccgacggttaccgcaacggcaacaatgacattgaacagatcgtctttgccgac
ggcaccatctggactccagagaccttaagcagcatgggcctcaccacgctgggcacctcg
ggtaatgacaccctcaagggctggcaaggcaaggatattctgctgggcggagatggcgat
gacgtgttggacggcggcatgggcagcaaccgtctggaaggcggcgccggtaacgatgtc
ctgaaagtggcgtatcggtccgcagataacgtgctgatcggcggtaccggcgatgacacg
ttgtatggcagcgcttacgcggatacgtatctgttcaacaaaggagacggccacgacacg
atcattgagcaaggcggtgatgacacactcgtctttggtgcggggttgcatcagaaagag
gcccgctttacgaaatcaggaaacgatctgtctatcctgttcaatgcgagtgaggatcag
gtgaccatagcggggtggttcaacgggtcagggcatcaggtggaatcgttggtgttccaa
gatgggacggtgctgtccggtgaggtggaacgtttgattgcagcgatggcgctgtcctct
gcggtgacgacgacgcaagccagtgtgcgtgataccaaggagtcacataggctggtggcc
agttcgattgtctaa
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