Xylella fastidiosa 9a5c: XF_2632 Help Entry XF_2632           CDS       T00033                                  Name (GenBank) RNA polymerase beta' subunit   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism xfa  Xylella fastidiosa 9a5c Pathway xfa03020   RNA polymerase Brite KEGG Orthology (KO) [BR:xfa00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     XF_2632  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:xfa03021]     XF_2632    03400 DNA repair and recombination proteins [BR:xfa03400]     XF_2632 Enzymes [BR:xfa01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      XF_2632 Transcription machinery [BR:xfa03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      XF_2632 DNA repair and recombination proteins [BR:xfa03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       XF_2632 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Apocytochr_F_C Motif Other DBs NCBI-ProteinID:  AAF85429 UniProt:  Q9PA87 LinkDB All DBs Position complement(2511584..2515876) Genome browser AA seq 1430 aa AA seqDB search MEAQSSIVLCFQLVPMPEFRRRSMKDLLNLFNQQRQTLDFDAIKIGLASPALIRSWSFGE VKKPETINYRTFKPERDGLFCAAIFGPIKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKV RRERMGSIELASPVAHIWFLKSLPSRIGLMLDMTLRDIERVLYFEAYVVTEPGLTPLERR QLLTEEQYLQARQEHADDFDATMGAEAVYELLRMIDLQSEMARLREEIVVTGSETKLKRL TKRIKLIEAFIESGNRPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNN RLCRLLELSAPDIIVRNEKRMLQESVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGR FRQNLLGKRVDYSARSVIIVGPNLRLHQCGLPKKMALELFKPFVFAKLQRRGLATTIKAA KKLVEREEAEVWDILEEVISEHPVVLNRAPTLHRQGIQAFEPVLIEGKAIQLHPLVCTAF NADFDGDQMAVHVPLSLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMSRAL ENKKGEGMVFANTSELKRAYDNSVVELHAKVKVRITEIETDDRGLRSKASLIVDTTVGRA LLSEILPEGLPFVLVNTEMTKKNISRLINSSYRMLGLKDTVVFADKLMYTGYAYATRAGV SICIDDMLIPIEKKEILGEAEQEVLEIQEQYQSGLVTAGERYNKVVDIWSRTNERIAKAM MDTIGTEKVVNTDGEIVDQKSMNSLYIMADSGARGSPQQIRQLAAMRGLMVRPDGSIIET PIKANFREGLSVQEYFNSTHGARKGLADTALKTANSGYLTRRLVDVTQDLCVVQLDCGTA GGLTMTPIVEGGDVVEPLKDRVLGRVVAEDVFLPGNDDEPIVTRSTLLDEQWVAKLEEAG VQSVKVRSPITCESPFGVCALCYGRDLARGHLVNMGEAVGVIAAQSIGEPGTQLTMRTFH IGGTALSAAAVDNITVKTSGSVKFTNLKYVEHVNGTLVAVSRSGEISVLDTHGRERERYK LPYGATINVKDMAEVKSGQILANWDPHNHPIVSEVAGFVRFIDFVDGVTVIEKTDDLTGL SSREIADLKRRGSQGKDLRPLVRIVDKKGNDLTIPGTDLSAQYLLPPRSIVNLQDGAPVG IGDVVAKIPQEASKTRDITGGLPRVADLFEARRPKDPAILAERSGVISFGKDTKGKQRLI IKDADGSEHEELIPKYRQIIVFEGEHVTKGETIVDGEPSPQDILRLLGIEPLAAYLVKEI QDVYRLQGVKINDKHIEVITRQMLRKVEIVDQGNSKFLNGEQVERQRVIDENAKLIARNE LPAKYNPVLLGITKASLATESFISAASFQETTRVLTEAAVRGTRDNLRGLKENVIVGRLI PAGTGQRYHSQRRYSSVGLTQSEMETLVGRSTSSGTEVTSPSKDAIPLGG NT seq 4293 nt NT seq  +upstreamnt  +downstreamnt ttggaggcccagagctccattgtcctctgtttccaactcgtcccgatgcccgaatttcgg agaagaagtatgaaagatctactcaatctttttaatcagcagcgccagacattggatttc gatgccatcaagattggccttgcctcgcctgccttgattagatcttggtcgttcggtgaa gtgaagaagccggaaacaatcaactatcgcacttttaagcctgagcgtgatggtttgttt tgtgctgctatctttggtcctatcaaggactatgaatgtttatgcggcaaatataagcgc atgaagcatcgaggggtggtctgtgagaaatgcggtaccgaggtgactttagccaaagta cgccgtgagcgtatgggttccattgagctagcttcgcctgttgctcatatttggttctta aaatcgctaccttcacgcattggattaatgctggacatgactttgcgtgatatcgagcgt gtcttgtacttcgaagcctatgtagtgactgagccgggtctaactcctttagaacggcgt cagctcctaaccgaagaacaatatttgcaagcccgtcaagagcatgctgatgacttcgat gctactatgggagccgaagctgtatacgaactcttgcgaatgattgacttgcaatcggaa atggctcgtttgcgtgaggaaatcgttgtcactggttctgagactaagctgaaacgtttg actaaacgtattaagttgattgaagcgttcatcgaatctggcaatcgtccggaatggatg attttgaccgtgttgcctgtactacccccagacctgcggccgctggtgccgttggacggc ggtcgcttcgcaacctctgatcttaatgacctgtaccgtcgagtcattaatcgtaacaat cgtctgtgccgcttattggagttaagtgctcctgacatcatcgtgcgcaacgagaagcgc atgttgcaagaatcggttgacgcgttgctagacaacggtcgtcgcgggcgtgctattact ggtactaataagcgtcccttaaaatcgttagcggacatgattaagggtaaacagggccgt tttcgccaaaatttgcttggaaagcgtgtcgattactctgctcgttcagtgattatcgta ggccctaatcttcggttacaccaatgtggattaccgaaaaaaatggcgcttgagctattc aaaccttttgtgtttgctaagctgcagcgtcgcggcttggctactacgattaaggcagct aaaaaactggttgagcgtgaagaagccgaggtctgggatattcttgaagaggttatttct gagcatcctgtggtattgaatcgtgcgccaactttacatcgccagggtattcaagccttt gagccagttttaattgaaggtaaagcgattcagttacatccgttggtttgtactgcattc aatgctgatttcgatggcgatcagatggccgtgcatgtgcctctttcgctcgaagctcag cttgaagcgcgtgcgttgatgatgtctaccaacaacatactgtctccagcgaatggtgag ccgatcatcgtaccatcacaggatgttgtacttggcttgtactacatgagccgtgcactt gaaaataagaagggcgaagggatggtgttcgccaataccagcgagctgaaacgtgcttac gacaatagcgttgttgaattgcatgctaaggtgaaggttcgtattacagagatagagact gatgatcgagggctgcgtagcaaggcttctttgattgtagatactacggtaggtcgtgca ttattgagtgagattcttccagaaggtttgccgtttgttcttgtcaatactgaaatgact aaaaagaacatttcgaggttgattaattcaagttatcgcatgcttggcttgaaggacacc gttgtatttgcagataaattgatgtatacgggttatgcctatgcgacacgtgccggtgtg tcaatctgtattgatgacatgctgattcctatcgaaaagaaagaaatattgggtgaagct gagcaagaagtgctcgagattcaggagcagtatcaatccggattggttaccgctggcgag cgttataacaaagtggttgatatttggtcccgtactaatgaacggattgccaaggcaatg atggatactatcggcactgagaaagtggttaacactgatggtgaaatcgttgatcagaag tcgatgaattcgctgtatatcatggctgattctggcgcgcgcggtagcccgcagcagatt cgccaattagctgctatgcgtggtctaatggtacgtcctgatggctcgatcattgagaca cctatcaaagctaactttcgtgaaggtttgagtgttcaggaatatttcaactctacgcat ggtgctcgtaaaggtttggctgatacggcattgaagacagcgaactctggttacctgact cgccgtctggttgatgtcactcaagatttatgtgttgtacagcttgattgcggcactgct ggtggattaactatgaccccgatcgttgaaggtggagatgttgttgagccacttaaggat cgcgtgttaggacgtgttgttgctgaggatgtattcctgcctggtaatgatgatgagccc attgtcactcgtagcaccttgcttgatgagcaatgggtagctaagttggaagaggccggt gtgcagtcagtgaaggttcgttctcctatcacatgtgagtctccgtttggcgtatgcgcc ctatgctatggtagggatcttgctcgtggtcatttggttaatatgggtgaagcagtaggt gtcattgctgctcaatcaatcggtgaaccaggtacgcagttgacgatgcgtaccttccat attggtggtaccgcgttgagtgcagcagcggtagataacattactgtaaaaactagcggc tcggtaaaatttactaatctaaagtatgttgagcatgtcaatggtactttggtggcagta tctcgttccggagaaatttcggttctagatactcacggccgtgagcgtgaacgctacaag ttaccttacggtgcgactataaatgtcaaggatatggctgaagttaaatcagggcaaatc ttggcaaattgggatccccacaatcacccaattgtttctgaagttgcaggttttgtccgt tttatcgactttgttgatggtgtcactgtcattgagaaaactgatgatctgactggttta tcttcgcgtgagattgctgatttgaagcgccgtggttcccaaggtaaggatcttcgtcct ttggtgcgtatcgttgataaaaaaggtaacgatctgactattcccggtactgatctttca gctcagtatttgttgcctccgcgttcgattgttaatcttcaggatggtgctccagttggc attggtgatgtggtggctaagattccacaggaggcctccaaaactcgggatatcactggc ggtttgcctcgggtggcggatctgttcgaagcgcgtaggccgaaagatcctgctattttg gctgaacgttcaggggtgataagttttggtaaagacaccaaaggtaagcagcgattgatt attaaagatgccgatggaagcgagcacgaagagttgattcctaagtaccgtcaaattatt gtgttcgagggcgagcatgtcaccaagggggagaccattgtggacggtgagccgagtcca caggatattttgcgtttactgggtatcgagccgttagctgcttacttggttaaagaaata caggatgtgtatcgtttgcagggtgtgaagatcaatgataagcatattgaagtcattaca cgccaaatgttgcgcaaagttgagattgttgatcagggaaacagtaagttcctcaatggt gagcaagttgaacgtcagcgtgttatcgatgaaaacgcgaagttaattgcgcgcaatgaa ttaccagcaaagtacaatccagtgttactaggtattactaaggcttctttggcaacggaa tcgttcatctcggcagcttctttccaagaaacgacccgtgtcttaactgaggctgcggta cgagggaccagggataatttgcgtggtttgaaggaaaatgtcatcgttggtcgccttatc ccggcgggtactggccagaggtatcatagccagcgtcgctatagttctgttggtcttact cagtctgaaatggaaaccttggttggtcgcagtacctcatctggtacagaagttacttcg ccttccaaggatgcgattcctcttggggggtaa

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