Xylella fastidiosa 9a5c: XF_2699
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Entry
XF_2699 CDS
T00033
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
xfa
Xylella fastidiosa 9a5c
Pathway
xfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XF_2699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xfa03021
]
XF_2699
03019 Messenger RNA biogenesis [BR:
xfa03019
]
XF_2699
Transcription machinery [BR:
xfa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
XF_2699
Messenger RNA biogenesis [BR:
xfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
XF_2699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA
Spore_III_AA
AAA_22
OB_RNB
S1CSD-TOTE-2
nSTAND_NTPase5
Mor
Motif
Other DBs
NCBI-ProteinID:
AAF85496
UniProt:
Q9PA21
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All DBs
Position
2577722..2578957
Genome browser
AA seq
411 aa
AA seq
DB search
MPAHKLLEIAEQLNIHEGVARARKQDVIFALLKVLTRHGEGVFADGVLEILPDGFGFLRA
AEASYLAGPDDTYISPSQIRRFNLRTGDHLSGRIRFPKDGERYFALSIVDTINGEPLEAS
KNKILFENLTPLFPRKRFRLERADGSTEDITGRILDLMAPQGKGQRALIVSPPKAGKTML
MQQVATAITTNHPEVHLIVLLIDERPEEVTEMQRTVRGEVISSTFDEPAARHVQVAEMVI
ERAKRLIEHKKDVVILLDSITRLARAYNNVVPSSGKVLTGGVDANALHRPKRFFGAARNV
EEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNCELHLNRRIAEKRVYPAIDINRSGTRR
EDLLIESDLLQKIWILRKLLHPMDEIAAIEFVLDKMKNTKSNDEFFGSMKR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgccagcacacaaactgctagaaatcgctgagcaactcaacatccacgaaggtgtagcg
cgtgcacgcaagcaagatgtgatctttgcacttctaaaagtactgacccgtcacggcgaa
ggcgtgtttgctgacggcgttctggaaatccttccagatggttttggctttctgcgcgca
gccgaagccagctacttggccggtccagacgatacctatatttcccccagtcaaattcgc
cgcttcaatctacgcactggtgatcacctgtcgggccggattcgtttccctaaggacggt
gaacggtactttgcattgtcaatcgttgatacgattaatggcgaacctctggaagcttcc
aaaaataagatcctttttgagaacctgaccccactgtttccacgcaaacgcttccgtttg
gaacgcgctgacggctcgacagaggatattaccggccgcatccttgatttgatggcacca
caaggcaaggggcaacgtgcgctaatcgtatctccccccaaagccggtaaaacgatgcta
atgcaacaggtagcaacagcgatcactaccaatcatccagaagtacacctgattgtatta
ctgattgacgaacgccctgaagaagtgacagaaatgcagcgcaccgttcggggcgaagtt
atttcctcaacgtttgacgagccagctgcacgccatgtacaagtcgccgaaatggtcatc
gaacgcgcaaagcgcttaatcgaacataaaaaggatgtagtcatcctacttgactcaatc
acccgtttggcacgtgcctataacaacgttgtacccagctcaggcaaggtactcactggt
ggcgtggatgcaaacgcactacatcgccccaaacgcttcttcggtgcagcacgcaatgtc
gaagaaggtggctcgctgaccatcatcgcaaccgcactcatcgataccggcagcaaaatg
gatgaggtgatctatgaagagttcaagggtactggcaactgcgagttacatctaaatcgc
cgtattgccgagaaacgcgtatatccggcaattgatatcaaccgttccggtactcgccgt
gaagatctattgatcgaatccgatctattgcagaaaatttggatccttcgcaaattactg
cacccaatggacgagattgcagcaatcgagtttgtgcttgataaaatgaagaacaccaag
tcgaacgacgagttctttggttcaatgaagcgctaa
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