Xylella fastidiosa subsp. fastidiosa GB514: XFLM_00105
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Entry
XFLM_00105 CDS
T01979
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
xff
Xylella fastidiosa subsp. fastidiosa GB514
Pathway
xff03030
DNA replication
xff03430
Mismatch repair
xff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XFLM_00105
03430 Mismatch repair
XFLM_00105
03440 Homologous recombination
XFLM_00105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xff03032
]
XFLM_00105
03400 DNA repair and recombination proteins [BR:
xff03400
]
XFLM_00105
Enzymes [BR:
xff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XFLM_00105
DNA replication proteins [BR:
xff03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XFLM_00105
DNA repair and recombination proteins [BR:
xff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XFLM_00105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADN62051
LinkDB
All DBs
Position
complement(25495..26214)
Genome browser
AA seq
239 aa
AA seq
DB search
MRNKKRQIVLDTETTGLEWSKGNRIVEIGAVELLDRRLSGDKFHRYLKPDVSFESGAQEV
TGLTMEFLADKPEFSMIADKFLAYINGAELIIHNAAFDLGFLDYELSRLGSQYGKITDRA
SVLDTLVMARERYPGQRNSLDALCKRLGVDNAHRQLHGALLDAQILADVYIALTSGQEEI
GFALPESSRGGVDAASVAFMPDVLLTRPCVVASQSELEAHEARLAKLRKIAGHVLWDAI
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaggaataagaagcgtcagattgttcttgatactgagaccactggcctggaatggagc
aaggggaaccgcattgtggagatcggtgcggtcgaactgcttgatcgccgactcagtggg
gacaaatttcatcgttatctcaagcctgatgtgtcgtttgagtccggtgcccaggaggta
acggggctgacgatggagtttctagcggacaagccagagttcagcatgattgccgataag
tttttggcttatatcaatggtgccgaactgattattcataatgcggcgttcgatctggga
ttccttgattacgagttatcgcggttgggttcgcagtacgggaaaatcacagatcgtgcc
agcgtgcttgacactttggtgatggctcgggagcgttatccgggtcagcgtaattcactg
gatgcattatgtaagcgtcttggtgtggataacgcccaccgtcagttacatggtgcatta
cttgacgcgcagatattggccgatgtttatatcgcgttgacctctggacaagaggaaatt
ggttttgcattgcctgagagcagccgtggtggtgtcgatgccgctagcgtggcatttatg
ccggatgtgttgttaacacgtccatgtgtggtggcgtcgcaatccgaactggaggcgcat
gaggcgcgtttggccaagttgcgtaagatcgctggtcatgtgctgtgggatgcgatatag
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