Xylella fastidiosa subsp. fastidiosa GB514: XFLM_00170
Help
Entry
XFLM_00170 CDS
T01979
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
xff
Xylella fastidiosa subsp. fastidiosa GB514
Pathway
xff03030
DNA replication
xff03430
Mismatch repair
xff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XFLM_00170 (holA)
03430 Mismatch repair
XFLM_00170 (holA)
03440 Homologous recombination
XFLM_00170 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xff03032
]
XFLM_00170 (holA)
03400 DNA repair and recombination proteins [BR:
xff03400
]
XFLM_00170 (holA)
Enzymes [BR:
xff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XFLM_00170 (holA)
DNA replication proteins [BR:
xff03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XFLM_00170 (holA)
DNA repair and recombination proteins [BR:
xff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XFLM_00170 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
WRW
Motif
Other DBs
NCBI-ProteinID:
ADN62064
LinkDB
All DBs
Position
42458..43489
Genome browser
AA seq
343 aa
AA seq
DB search
MELRPEQLANLPANQPLEPAYLIAGPETLRLVEAADAIRTRARADGITEREIFDVESRDF
DWQQLASSFNAPSLFSSRRLIEIRLPGGKPGKEGSEVITRFCATPSSDVILLITCNEWSK
AHHGKWTDAIARIGKIAIAWSIKPHELPDWITRRLHSKGLRANTDVIHRLSTRLEGNLLA
AAQEIDKLALLNQGPLLDLETMESFVADTARYDVFRLTEAMLSGQPTATIRMLGKLRAEG
EAVAALLPILIKELIRTTTLSWVKHDNGNLAAEMKAQGIWETRQAPFKRALQRHTSPYKW
EHFVAEVGRIDRITKGRNDGNAWLSLERLMVAVAEADATRLLA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcgcccagagcaactcgccaacctgcctgccaatcaacccttagagcctgcc
tacctcatcgccggccccgaaaccctacgcttagtagaagctgccgatgcgatacgtacg
cgtgctcgtgccgacggcatcaccgaacgcgaaatattcgacgtcgaaagccgtgacttc
gactggcaacaacttgcctccagcttcaacgcccccagcctcttcagctcacgtcgctta
atcgaaatacgcctcccgggaggtaaacctggtaaagaaggcagtgaagtcatcacaagg
ttctgcgccaccccctcatcagatgttatcttgctgatcacatgcaacgaatggagcaaa
gcacaccatggcaagtggaccgatgccatcgctcgcatcggtaaaatcgcaatcgcctgg
agcatcaagcctcacgaactacccgactggattacacggcgcctacatagcaaaggctta
cgtgccaacacggatgtaatacaccgattaagcacacgcctagaaggcaacctactggcc
gccgcccaagaaattgacaaattggcgttattgaatcaaggccctctcctcgacctggag
accatggaatcattcgttgccgacacagcgcgttacgacgtattccgacttaccgaagcg
atgctctccggccaacccaccgcaacgatacgcatgctcggcaaactgcgggccgaaggt
gaagcagtggcagcactgctgcccattctgatcaaagaactcatccgtaccacgaccctg
tcatgggtcaaacatgacaacggcaatctagctgccgaaatgaaagcccagggaatctgg
gaaacacgtcaagcacccttcaagcgcgcattacaacgtcatacctcaccgtacaaatgg
gaacacttcgttgccgaagtcgggcgcatagaccgcatcaccaaaggacgcaacgacggc
aatgcctggctgtcactcgaacgtctcatggtggcagtagcagaagcagatgcaacacgt
ctgctagcataa
DBGET
integrated database retrieval system
