Xylella fastidiosa subsp. fastidiosa GB514: XFLM_00480
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Entry
XFLM_00480 CDS
T01979
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
xff
Xylella fastidiosa subsp. fastidiosa GB514
Pathway
xff00550
Peptidoglycan biosynthesis
xff01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xff00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XFLM_00480
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xff01003
]
XFLM_00480
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xff01011
]
XFLM_00480
Enzymes [BR:
xff01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
XFLM_00480
Glycosyltransferases [BR:
xff01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
XFLM_00480
Peptidoglycan biosynthesis and degradation proteins [BR:
xff01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
XFLM_00480
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Paralog
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Motif
Pfam:
Transgly
PBP1c_linker_2
Transpeptidase
BiPBP_C
PBP1c_linker
Motif
Other DBs
NCBI-ProteinID:
ADN62122
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All DBs
Position
complement(102257..104641)
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AA seq
794 aa
AA seq
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MFVLPSLSASMFGRLRDDRALTWLRWSCAGLLSLLLLLDVLCPLPLPTSHDMALLVVARD
GTPLRAFPDADGVWRYPAQLGQVSPLYVQALLTYEDRMFWRHPGVNPWALLRAGGLWLRY
GHVVSGGSTLTMQAARILEPHGRTPWGKLKQLLRAVQLEVHLSKRQILQLYLERAPYGGT
IQGVEAASWAYLGKSAARLSHAEAALLAVLPQSPSRLRPDRNPQLARQARDKVLARMAVL
GVWSDEEVKDARLEPVVARALQPPMYAALLAQRLRVQRPHAARIVTTLDIDLQRTLEERV
STYFSPLPERTSAAVLVMDNQSLEARAYVGSVTFGDAKRLGHVDMVRAWRSPGSTLKPFL
YGMALDQGLIHSESLLVDAPQHFGDYRPGNFDAAFTGPIGASSALRQSLNVPAVDLLERI
GPARFATRLAHAGVQLRFPRGATPNLALILGGAGAQLQELVGAFSVFNRGGVAGRVRYTP
EDPRIERRLISPGAAWIVREILAANPRPGYGRGTFDTAMRPSVAWKTGTSYGFRDAWALG
STRRYTVGVWVGRPDGTPLPGQYGAITALPLLFDVIDVLPRAPGDAVPEPMPASVEQVDI
CWPLGFAAASTPPELCRRRYSAYVLDGVVPPTFAERDAKLWRSGLERFQVDVRSGLRVRP
DCRLPHLIREQQIARWPTLVIPWLDAVERRATHLPRLASDCSEDDRADAGVLYIDGLVEG
ATLQRPPGSTKPVHLQLRALGSETRIDWLLDGRWIAQTVGGQTFQRDFPEPGTYILTALA
EDGAWNRMQFRVLR
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgcttccatcattgtcggcctccatgtttggtcgtttgcgcgatgatcgtgca
ttgacttggctgcgctggagttgtgctggactgctttcgctgcttcttctgttggatgtg
ctttgcccattgccattaccgacctcgcacgatatggctttgctggtggttgctcgagat
ggtactccattgcgtgccttccctgatgctgatggtgtatggcgctacccggcgcagttg
ggacaggtgtcgccgttgtatgtgcaggctctgttgacctatgaggaccgtatgttctgg
cgccatccgggggtgaatccttgggcgttgttacgtgctgggggcctgtggctgcgttat
ggtcatgtcgtttccggtggctcgacgttgacaatgcaggcggcacggattcttgagccg
catggccgtactccttggggcaaactcaagcagttgttgcgtgcagtacagttagaagtc
catttgagtaagcgccagattttgcagttgtatttggaacgtgccccttacggagggacg
atccagggcgttgaggcggcaagctgggcttatcttggcaagtcggcggcacgcttatcg
catgctgaggcggcgttgctggcggtattgccgcagtcgccaagccggttgcgtccggac
cgtaatccgcagttggcacggcaagcacgcgataaggtgctggcacgcatggcagtgctt
ggtgtctggtctgatgaagaggtgaaagatgcgcggctggagccggtggttgcacgtgca
ttgcagccacccatgtacgcggcgttgttggcgcagcgtctgcgtgtgcaacggccacat
gctgcacgcattgtgaccacgttggacattgatttgcagcgtactcttgaggaaagagtg
agtacctatttctcaccgttacctgagcgcacttctgctgcggtgctggtgatggataat
caaagcctggaagcacgtgcctacgttggttcggtgacattcggtgatgccaagcggttg
ggtcacgtggatatggtgcgggcttggcgttcgccgggttccacacttaaaccgtttctt
tatggaatggcgttggatcagggcttgattcattctgagagtttgttggtcgatgcgcca
cagcattttggtgattatcgtccgggtaatttcgatgctgcgttcactggccctattggt
gcgtccagtgcattgcgacagtcgttgaacgtgcctgcagtcgatttgttggaacggatt
gggccggctcggtttgcgacgcgtctggcgcatgcaggggtgcagttgcgtttcccacgc
ggtgccaccccgaatttggcgttgatcctcgggggtgcaggggcacagttgcaggagctg
gtgggtgccttctcggtgttcaaccgcggtggcgtggcaggacgggtgcgttataccccg
gaggatccgcgtattgagcgtcgtttgatctcccctggtgcggcttggattgtgcgcgag
attcttgctgctaacccgcgccctgggtatggcaggggcacgttcgatactgcgatgcgt
ccgtccgtggcttggaagactggtaccagctatggcttccgtgatgcttgggcgctgggg
agtacccgccgctacacagtgggtgtttgggttgggcgtccggatggtaccccgctgccg
ggtcagtatggtgcgattacggcattaccgttgttgtttgatgtgattgatgtgttacca
cgcgcgcctggtgatgctgtgccggagccgatgccagccagtgtggagcaggttgatatc
tgttggccgctgggttttgctgctgctagcacgccgccggaattgtgccgacggcgctac
agtgcctacgtattggatggggtggtgccgccgaccttcgctgagcgtgatgcgaaattg
tggcgtagcggtttggaacgattccaggtcgatgtgcgtagtggtttgcgtgttaggcct
gattgtcgtctgccgcatctgatcagggagcagcagattgcacgttggccgacgttggtg
atcccatggcttgatgctgtggagcgtcgtgcgacgcatctgcctcggctggcctcagac
tgttctgaggatgatcgtgctgatgctggggtgctgtacattgatggtctcgttgaaggt
gccacattgcagcgtccacctggtagtaccaagccggtacatctgcagttgcgtgcattg
ggcagtgaaacacggatcgactggctcttggatgggcgctggattgctcaaactgtgggg
ggacagacctttcagcgtgatttcccagaaccagggacgtatatcttgactgcgttggct
gaggatggtgcttggaacaggatgcagttccgcgttttacgttaa
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