Xylella fastidiosa subsp. fastidiosa GB514: XFLM_01225
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Entry
XFLM_01225 CDS
T01979
Name
(GenBank) type I secretion system ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
xff
Xylella fastidiosa subsp. fastidiosa GB514
Pathway
xff02010
ABC transporters
xff03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
xff00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
XFLM_01225
03070 Bacterial secretion system
XFLM_01225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xff02000
]
XFLM_01225
02044 Secretion system [BR:
xff02044
]
XFLM_01225
Transporters [BR:
xff02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
XFLM_01225
Secretion system [BR:
xff02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
XFLM_01225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_29
AAA_16
AAA_22
AAA_18
NB-ARC
DUF87
nSTAND3
PRK
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ADN62257
LinkDB
All DBs
Position
252941..255124
Genome browser
AA seq
727 aa
AA seq
DB search
MHIKDGNMTYKNPLATQQNQRASNPQPDSALHGLVLLAQFHGIAADPVQIAHDFGRSGEP
FDETTLLLAAKKLGLKAKVVTQPVTRIAMAALPALALIPGGTAFIVAKVTGNQILIHDLA
DQRPRTISHDEFTARYAGRLLQVASRASVLGNLAKFDFSWFIPAVVKYRKLLAEVFAVSL
FIQIFALVTPLFYQVVMDKVLVHQALSTLEVIVVGLISLALFEVVLTALRTHVFAHTTSK
IDVELGARLFRHLLALPLAYFESRRVGDTIARVRELENIRHFLTGQALTSVLDLLFTVVF
LSVMFWYSGWLTLIVVISLPLYALISAFITPVLRKRLDEKFARGADNQAFLVETVSGIGT
VKAMAVDPRVTRTWDNQLAGYVGASFSVTKIATLGQQSVQLVQKLTNVAVLFWGAKLVID
GQLSLGQLIAFNMLSGQVTAPIIRLAQLWQDFQQVGLSVERLGEILNTRTELPGSRMTLP
PIQGRITFERLIFRYRPDTPDVLSGIDLDIQPGEVIGIVGRSGSGKSTLTKLVQRMYVPE
RGRVLVDSHDLSLADPAWLRRQIGVVLQENFLFNRSVRENIAMADPGIPLERVIHAATLA
GAHTFISELPEGYDTKIGEHGTGLSGGQRQRIAIARALIGDPRILIFDEATSALDYESEH
AVMQNMRAICKGRTVLIIAHRLSTVRNADRIVVIDKGKIVESGSHETLLNRNNGHYAHLY
RLQQGTT
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
ttgcacattaaggatggcaacatgacatacaaaaatccccttgcaacgcaacagaatcaa
cgcgcttccaatccacagcctgacagcgcactccacggcttagtgctccttgcccaattc
catggcattgcggctgaccccgtacagatagcgcatgacttcgggcgcagtggcgaacca
ttcgatgaaacaaccttgctactggccgccaaaaaacttggactaaaagccaaagtcgtc
acccaaccggtcacccgtatcgcaatggccgcattacctgcactcgcactgatccctgga
ggaacagcatttatcgtcgccaaagtgacaggcaaccagatactgatccacgacctggca
gatcaacggccacgcacaatctcacacgatgaatttaccgcacgctacgccggccgctta
ctccaagtcgcctcccgcgcatcggtcctaggaaatctggctaaattcgactttagctgg
ttcatccccgcagtggtcaaatatcgcaaactgctggctgaagtctttgcagtgtcctta
tttatccagatattcgcactggtgacacccctgttctaccaagtcgtgatggacaaagtg
ctcgtacaccaagcactcagcacccttgaagtcattgtcgttggcctcatctccctggcc
ttattcgaagtagtactcaccgcactacgcacccatgtcttcgcacataccaccagcaaa
attgatgttgaactcggcgcacgcttattccgccatctattagcattaccgttagcgtat
tttgaatcgcgccgggttggcgacaccatcgcccgcgtacgcgaactagaaaacatccgc
cacttcctcaccggccaagcactgacctccgtcttagacctcctattcaccgtcgtcttt
ttgtccgtcatgttttggtacagcggctggctcaccctgattgtggtgatctcattaccc
ctgtacgcactgatctccgcattcatcaccccagtactccgcaaacgtctggatgaaaaa
tttgcacgcggcgcagacaaccaagcatttttagtggaaaccgtcagcggcattggcacc
gttaaagcaatggccgtagacccacgtgtcacccgcacctgggacaaccaactggcaggc
tacgttggtgccagctttagcgttaccaaaattgccaccctcggccaacagagcgttcaa
ttagtacagaaactgaccaacgtcgccgtattattttggggcgccaaactggtaattgac
ggacaactgtccctcggacaactaattgccttcaacatgttgtccggccaagtcactgcc
cccatcatccgactcgcccagctatggcaggattttcaacaagtcggactctctgtcgaa
cgactcggcgaaattctgaacacccgtaccgaactccccggcagccgcatgacattgccg
cccatccaagggcgcatcaccttcgagcgcctcatcttccgttaccgtccagataccccc
gacgtactctccggaatcgacctagacatccaacctggcgaagtcatcggcatcgtagga
cgctccggttcagggaaaagcaccctgacaaaactcgtacagcgcatgtacgtcccagaa
cgcggccgcgtcttggtcgacagccacgacctctcattggccgatcccgcctggctgcgt
cgccaaattggcgtcgtactgcaagaaaatttcctgttcaaccgcagcgtccgtgaaaac
atcgccatggccgacccgggaatccccctggaacgcgtcatccacgcagcgacattagcc
ggtgcccataccttcatttctgaactaccagaaggctatgacaccaagattggcgaacac
ggtacaggactctccggcggccaacgccaacgcatcgcaattgcccgcgccctgattggc
gacccacgcatccttattttcgatgaagccaccagcgcactcgactacgaatcagaacat
gccgtcatgcaaaacatgcgagccatttgcaaaggccgcaccgttctcatcatcgcccac
cgcctctccacagtccgtaatgccgatcgtatcgtcgtcattgataaagggaaaatcgta
gaaagcggctcccacgaaacactcctcaaccgcaacaacggtcattacgcccacctctac
cgactccaacaagggaccacatga
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