Xylella fastidiosa subsp. fastidiosa GB514: XFLM_01905
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Entry
XFLM_01905 CDS
T01979
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
xff
Xylella fastidiosa subsp. fastidiosa GB514
Pathway
xff03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XFLM_01905 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xff03019
]
XFLM_01905 (groEL)
03110 Chaperones and folding catalysts [BR:
xff03110
]
XFLM_01905 (groEL)
03029 Mitochondrial biogenesis [BR:
xff03029
]
XFLM_01905 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xff04147
]
XFLM_01905 (groEL)
Enzymes [BR:
xff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
XFLM_01905 (groEL)
Messenger RNA biogenesis [BR:
xff03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
XFLM_01905 (groEL)
Chaperones and folding catalysts [BR:
xff03110
]
Heat shock proteins
HSP60 / Chaperonin
XFLM_01905 (groEL)
Mitochondrial biogenesis [BR:
xff03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
XFLM_01905 (groEL)
Exosome [BR:
xff04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
XFLM_01905 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
XFLM_01905 (groEL)
Exosomal proteins of breast cancer cells
XFLM_01905 (groEL)
Exosomal proteins of colorectal cancer cells
XFLM_01905 (groEL)
Exosomal proteins of bladder cancer cells
XFLM_01905 (groEL)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADN62384
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All DBs
Position
390137..391780
Genome browser
AA seq
547 aa
AA seq
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MAAKEIIFSEKARSRMVHGVNLLANAVKATLGPKGRHVVLDKSFGSPIITKDGVSVAKEI
ELADKFENMGAQMLKEVASKTNDHAGDGTTTATVLAQALIREGCKAVAAGMNPMDLKRGI
DKAVIAAVTELKKISKPTSDDKAIAQVATISANSDESIGNIIAEAMKKVGKEGVITIEEG
TTLENELDVVEGMQFDRGYSSPYFINNQQSQIVELDNPYILLHDKKISSVRDLLTVLDAV
AKESKPLLIVAEEVEGEALATLVVNNIRGIIKVCAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLSLEKATTSHLGKAKKVRVSKENTTIIDGMGDNDAINGRVKQIKTQIEETTSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVDDALLATRAAVEEGVIPGGGVALI
RAITAISNLKGANEDQTHGIQIALRAMEAPLREIVANAGEEPSVILNKVKEGKDNFGYNA
ATGEFGDMVNLGILDPTKVTRSALQNAASIAGLMITTEAMVAEAPKKDEPTPPAAGGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagaaattattttcagtgaaaaagcccgttcacgtatggtgcacggggtg
aacctgcttgctaatgcagtgaaagccaccttaggtcccaaaggccgccacgtagtgctt
gataagagcttcggctccccaatcattactaaagacggcgtctctgtcgccaaagagatt
gagttggccgacaagtttgaaaacatgggcgcacaaatgcttaaagaagttgcgtccaaa
acaaatgaccatgcaggcgacggcaccaccactgcaacggtactagcccaggcgttgatc
cgtgaaggatgcaaagcagtggccgctggtatgaatccaatggatcttaagcgtggtatc
gataaagcagtcattgccgcggttaccgaactgaagaagatctccaagccaaccagcgac
gataaagccattgcccaagtcgcaaccatctctgctaactcagacgagtctatcggcaac
attattgccgaagcaatgaagaaggtcggtaaagaaggagtgattaccattgaggaaggc
acaactctagaaaacgaattggatgtcgtcgaagggatgcagtttgaccgtggttactct
tcgccatatttcatcaacaaccagcagtcccaaattgttgagctggataatccctacatc
ctccttcacgacaagaaaatttccagtgtgcgcgatttactcaccgtgcttgacgccgtc
gccaaagaaagcaagccgttgctgatcgtcgctgaggaagtcgaaggcgaagctttggca
actctggtcgttaacaacatccgcggcatcatcaaagtctgcgcagtcaaagcacctggc
ttcggtgatcgtcgcaaagccatgctggaagatatggctgtgctgacaggcggcaccgtc
atctcggaagaagtaggtctgtctctggaaaaggccacgaccagccatcttggcaaggcc
aagaaagtacgcgtctctaaagaaaacaccaccattattgatggtatgggtgacaacgat
gcgatcaatggtcgcgtcaagcaaatcaagacccagatcgaggaaaccacctcggactac
gaccgcgaaaaactgcaggaacgtgtagccaagctcgccggtggtgtagccgtcatcaag
gtcggtgctgcaaccgaagtggaaatgaaggaaaagaaagcacgtgttgatgatgcttta
cttgcaacccgtgcagccgttgaagaaggagtgattccaggtggcggcgtggccctgata
cgtgcaatcacggcaatcagcaatctgaagggtgccaatgaagaccagacacacggcatt
caaatcgcattgcgcgctatggaggcaccattacgcgaaattgttgccaacgccggtgaa
gagccatcggtcatcttaaataaggtgaaagaaggcaaggacaattttggctacaacgcc
gctactggcgaattcggcgatatggtcaaccttggcatcctggacccaaccaaggtcacc
cgttcagcactccagaacgctgcttcaatcgctggcctgatgatcaccacagaagcaatg
gtcgccgaggctccgaagaaagacgagccaaccccacctgctgctggtggcggcatgggc
ggtatgggcggtatggatttctaa
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