Xylella fastidiosa subsp. fastidiosa GB514: XFLM_03010
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Entry
XFLM_03010 CDS
T01979
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
xff
Xylella fastidiosa subsp. fastidiosa GB514
Pathway
xff03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XFLM_03010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xff03400
]
XFLM_03010
DNA repair and recombination proteins [BR:
xff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XFLM_03010
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XFLM_03010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
DUF87
Motif
Other DBs
NCBI-ProteinID:
ADN62601
LinkDB
All DBs
Position
complement(627827..629836)
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AA seq
669 aa
AA seq
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MTGLFQLVSSYSPSGDQPAAVQKLVTNFHAGIAKQVLLGVTGSGKTYTIANVVEQIQKPT
LVMAPNKTLAAQLYGEFKAFFPHNAVEYFVSYYDYYQPEAYVPASDTFIEKDSSINEYIE
QMRLAATKALLSRSDVLVVATVSAIYGLGAPEDYLSLRLILSLGEHIEQRQLIRHLTELQ
YTRNELDLVRGSFRVRGEVVDVFPAESEMEALRIELFDGEIESLSLFDPLTGQTVRKLQR
FSVYPKTHYATTRERTLSAVDTIKDELKEYLELLYGRNKLVEAQRLAQRTQFDLEMMAEV
GYCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMFKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEVRSPRSIYVSATPGSYEFRESAGEVIELLVRPTGLID
PEIEIRPVATQVDDLISQINACIKLGDRVLVTTLTKRMAENLTEYLSEQGIRIRYLHSEI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTSSLIQTIG
RAARSVRGRAILYADKVTRSMRAAIDETERRRQKQKEYNAENGIVPKSVVRPISDILEGA
RDGVEVKSKGKGRRVDEVPADYGALNQAEIAAQMKVLEQKMYQHARDLEFEDAARIRDQI
QRLREAGLG
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtttgtttcagcttgtttcttcatactctccttctggggatcagcctgcggct
gtacagaagctagtcactaatttccatgctggcattgctaagcaggtgttgcttggcgtt
actggttctgggaagacttacaccatcgctaatgtggttgagcagattcagaagccaact
ctggtgatggcgccaaacaagacgttggcagcacagctttacggggaattcaaggcgttc
ttcccgcacaatgcggtggaatattttgtcagctactatgactactatcagcctgaggcg
tatgttccagcctcggacacgttcattgaaaaggacagttctatcaatgaatacattgaa
cagatgcgtttggctgcaacgaaggctttgctgtcacgttctgatgtgttggtggtggcg
accgtgtcggcgatttatggtttgggtgcgcctgaggattatctttcgttacgtttgatt
ttgtcgctgggtgagcatattgagcagcggcaattgatcaggcatctcactgagttgcag
tacactcgtaacgagttggatttggtgcgtggtagtttccgtgtacgtggtgaggttgtt
gatgtattcccggctgagtcagagatggaggcgctgcgcattgagttgtttgatggtgag
atagaaagtttgagcttgttcgatccgcttaccggtcagacggtacgtaagttgcaacgt
tttagtgtttaccctaaaacccactatgcaactacgcgtgaacgtacgctcagtgccgtt
gatacgatcaaggatgagctgaaagagtatctagaacttctgtatgggcggaataagttg
gttgaggcgcaacgtttagctcagcgtactcagttcgacttagagatgatggccgaggtt
ggttattgcaatggtattgaaaattactctcgtcacttaactggtaaggctccgggggaa
cctccaccgacgttgttcgattatcttcctccggatgcgctactggtcattgatgagtcg
catgtgacaattccgcagatcggtgcgatgttcaagggggaccgttcccgtaaagaaacg
ctggtggaatttggtttccgtttaccatcggcgttagacaatcgaccgcttcgctttgag
gaatgggaagtgcgttcgccgcgtagcatttacgtctcggcgactccaggatcatatgag
ttccgcgagtccgcgggtgaagtcatagagttgctggtgcgtccgaccggcttgattgat
cctgagatagaaatccgtccggttgcgacgcaggtggatgatctgatttcccagatcaat
gcgtgtatcaagttaggtgatcgggttttggtcaccacgttaactaagcgtatggctgag
aacctcactgaatatttgagcgagcagggtatccggatacgttatttgcattcggaaatc
gatacggtagaacgtgtggagatcatccgtgatttgcgtcttggtaaattcgatgtgctg
gttggtatcaaccttctacgtgagggattggatatgccggaggtgtcgttggtggccatt
cttgacgctgataaagaggggtttttgcgttcgaccagttcactgattcagacgattggt
cgtgccgcacgcagtgtgcgcggtagggcaatcttgtatgccgataaagtgactcgttca
atgcgcgctgcaattgatgaaaccgagcgacgtcgacaaaagcagaaggaatacaatgct
gagaacggtattgttccgaaatccgttgtacggcccattagcgacattttggagggtgcg
cgagatggtgtcgaggtgaagagcaaggggaaggggcgcagagttgatgaggttcccgct
gactatggtgcgcttaatcaagctgagattgccgcacagatgaaagtgctggagcaaaag
atgtaccagcatgcgcgtgatttggagtttgaggatgcggcgcgtattcgcgatcaaatt
cagcggcttagggaggctggtctgggttaa
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