Xylella fastidiosa subsp. fastidiosa GB514: XFLM_03115
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Entry
XFLM_03115 CDS
T01979
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xff
Xylella fastidiosa subsp. fastidiosa GB514
Pathway
xff00260
Glycine, serine and threonine metabolism
xff00460
Cyanoamino acid metabolism
xff00630
Glyoxylate and dicarboxylate metabolism
xff00670
One carbon pool by folate
xff00680
Methane metabolism
xff01100
Metabolic pathways
xff01110
Biosynthesis of secondary metabolites
xff01120
Microbial metabolism in diverse environments
xff01200
Carbon metabolism
xff01230
Biosynthesis of amino acids
xff01240
Biosynthesis of cofactors
xff04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xff00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
XFLM_03115 (glyA)
09102 Energy metabolism
00680 Methane metabolism
XFLM_03115 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XFLM_03115 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
XFLM_03115 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
XFLM_03115 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
XFLM_03115 (glyA)
Enzymes [BR:
xff01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
XFLM_03115 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ADN62616
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Position
complement(643529..644782)
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AA seq
417 aa
AA seq
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MFPRDARLDMYDPELAKAIAAEVRRQEDHVELIASENYCSTLVMQVQGSQLTNKYAEGYS
GKRYYGGCEYVDIAEQLAIERAKKLFGADYANVQPHSGSQANQAVYFALLQPGDTILGMS
LAHGGHLTHGANVNVSGKLFNAVQYGVNAQGLIDYEAVESLALEHRPKMVVAGFSAYSQK
IDWARFRAIADQVGAYLLVDMAHVAGLVAAGVYPSPLPHAHVVTSTTHKTLRGPRGGIIV
AQAPQEALVKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKVYQQQVVKNAKAMAG
TLMLRGYKIVSGGTENHLMLVDMIGRDVSGKDAEGALGQVHITVNKNAVPDDPRSPFVTS
GLRLGTPAVTTRGYQEQDCVDLAHWIADVLDAPADVTVIAAVREKVAAQCKKYPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgcgtgatgctcgtcttgatatgtacgatcccgagttggctaaggccatcgct
gctgaagtgaggcgtcaggaggatcacgttgagttgattgccagtgaaaattattgcagt
acgttggtgatgcaggtgcaggggagtcaactgactaataagtatgctgaagggtattct
ggaaagcgttactacggtggttgtgagtatgtcgatatcgctgagcaattggcgattgag
cgtgccaaaaaactgtttggtgccgattatgccaatgtgcagccccatagcggttcacaa
gccaatcaagcggtgtactttgccttgttgcagccaggcgatacgatcctcgggatgagc
ttggcgcatggcggtcacttgactcacggcgccaatgttaatgtgtctggcaagttgttc
aatgcggttcagtacggagtgaatgctcaagggttgattgattacgaggctgttgaatcg
cttgcgttagagcatcggccgaagatggttgtggcgggcttttcggcgtattcgcagaaa
attgattgggcgcgcttccgtgccattgctgatcaggtgggcgcttacttgcttgttgat
atggcacatgtggctggcttggtggcggctggtgtctatccgagtccgctgccgcatgcg
catgttgtgacttcgacgacgcataagacactgcgcggcccacgtggcggcattattgtt
gcgcaggctccgcaggaggcgttggttaagaagttgcagtcgatagtgtttcctgggatc
cagggtggtccattgatgcatgtgatcgcggccaaagcggttgcttttaaggaggcgttg
gagcctgcgtttaaggtgtatcagcagcaggtggtgaagaatgcgaaggcgatggctggg
accctcatgttacgcggctataagattgtctctggtggtacagaaaatcatttgatgttg
gttgacatgatcggtagggatgtctctgggaaggacgctgagggcgcattgggtcaggtt
catatcactgtcaataagaatgcggtaccggatgatccgcgctctccgttcgtaacctcc
gggttacgcttggggactccagcagtcacgacacggggttaccaggagcaggattgtgtg
gacttagcgcactggattgctgatgtgcttgacgcgcctgcagatgtgacggtcattgcc
gcagtccgtgagaaggttgcggcgcagtgcaagaagtatcctgtgtatcgctga
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