Xylella fastidiosa subsp. fastidiosa GB514: XFLM_03145
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Entry
XFLM_03145 CDS
T01979
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
xff
Xylella fastidiosa subsp. fastidiosa GB514
Brite
KEGG Orthology (KO) [BR:
xff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xff03009
]
XFLM_03145
Enzymes [BR:
xff01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
XFLM_03145
Ribosome biogenesis [BR:
xff03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XFLM_03145
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TTC3_9th
RPN7_PSMD6_C
Motif
Other DBs
NCBI-ProteinID:
ADN62622
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Position
complement(651233..652216)
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AA seq
327 aa
AA seq
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MSDDLAGFSRQTTVPDGAAGRRFDAVLAELFPEFSRSRLTEWIKSGDVLLNGVLVRPRDP
VYGGEVVWLQVMPDIRTDAVPQDIPLDILYEDEHVFVINKPAGLVVHPGAGNPDGTLVNA
LLHRDPALAAVPRAGVVHRLDKDTSGVMVVARTLQAQTALVEQLSSRQVHRQYLAVVVSA
LVSGGTVNAAIERHPRDRLRMEVSDTGKEAVTHYRLRERFRAHTALECRLDTGRTHQIRV
HMAHLRHPIVGDRLYGGSLKLPKGGTDALVAMLRGFKRQALHAEVLEFLHPVRALPVRIV
APVPEDLCQLLAALREDSALFFEREWR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgacctcgctggattctcccgtcagaccactgtgccggatggtgctgctggc
cgtcgtttcgatgctgtgttggctgagctttttccggaattctcgcgctcgcgcttgacg
gaatggatcaaatctggggatgtgctgttgaatggagtgttggtacgaccgcgtgatccg
gtttacggtggcgaggtggtttggttgcaggtcatgccagatatccgcactgatgcggtg
ccgcaggatattccgttagatattttgtacgaggatgagcatgtattcgtcatcaataag
cctgcggggttggtcgtacacccgggggctggtaatcccgatgggacgttggttaatgcg
ttgctgcatcgtgatccggcgttagcggcggtgccgcgtgctggggtggtgcatcgtttg
gacaaggatacgagtggggtgatggtcgtggcacgcacgctgcaggcgcagactgcgttg
gtggagcagttgtcttcacgtcaggtacatcgtcagtatttggcagtcgttgttagcgcg
ttggtttccggtggtacggtgaatgcggcgattgaacgtcacccgcgtgaccggctgcgg
atggaggtgtcagacacagggaaggaggcagtcactcattatcggttgcgggaacgtttc
cgtgcgcatacggcattggagtgtcgtttagatactgggcgtacgcatcagatccgtgtc
cacatggcgcatctgcgccatccaattgtcggtgatcggttgtacggtgggtcgttgaag
ttgccaaagggcggcacggatgccttggtggccatgctgcgtggattcaagcgtcaggca
ttgcatgctgaggtgttggagtttctgcatcctgtaagggctctgcctgtgcgtattgtt
gcgccggtgccagaggatttatgtcagcttcttgcggcgctgcgtgaggacagtgcgctg
ttctttgagcgggagtggcgttga
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