Xylella fastidiosa subsp. fastidiosa GB514: XFLM_04735
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Entry
XFLM_04735 CDS
T01979
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
xff
Xylella fastidiosa subsp. fastidiosa GB514
Pathway
xff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XFLM_04735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xff03400
]
XFLM_04735
Enzymes [BR:
xff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XFLM_04735
DNA repair and recombination proteins [BR:
xff03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XFLM_04735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
AAA_30
Zn_ribbon_PriA
DUF7129
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ADN62909
LinkDB
All DBs
Position
1011602..1013803
Genome browser
AA seq
733 aa
AA seq
DB search
MPPTILRVALPIPLPQCFDYLPPSGIPLPDSTLGCRVRVPFGKRELIGVVVELPSAEMSV
PLREAFAWIDRIPILDGELAQSLQWLSHYTHTPLGEILATALPGLLRHGKPLPETWTCWA
WRLTETGRTAAPKLRRNSRSAQMAELLTASDQTEDALNTRMNRWRAVAHNLTKRGYVERI
KKPTTVPVIIQTTSNTVPVLNTEQQKAVETLNANVGFKTYLLDGVTGSGKTEVYLQAIAT
CLAASKQALVLVPEIGLTPQLLTNFHARLGIPVHALHSKLADSERARVWATARCGEARLV
LGTRSAVFTPLPNAGLIIVDEEHDTSYKQQDGIRYNARDFALVRGKALNVPVILGSATPS
LESLYNAHNGRYKHLRLSYRAGQAYAPQVRVLDVRKRPLKDGLSPEVLTGINATLARDEQ
VLVFKNRCGYSPVLLCHDCGWTATCHQCSTSVHHTPMTVYSGGTYLQCHHCGARQPMPLS
CPDCGSTALQPQGIGTERLEARLIEAFPKHPVVRIDRNTTKHRDGLKTQFTKLGNAAGIL
VGTQILAKGHHLPRLTMVVVVGIDEGLFSADFRATEKLSQQLIQVAGRAGRAKHAGEVWL
QTHHPDHPLLQTLINGGYHTFANTELQQRQAAWLPPFAHLALLRAEAKDTTSTQQFLTTI
RKHMPTNNAVECYGPMSAPMPRRAGYERYQLLLSSSQRNALHRTLNVLIPAIHALPEARR
VRWSLDVDPVDLY
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgccccctacgatcctacgtgtggcgttgccaatccctttaccgcaatgcttcgactat
ctgccgccaagcggcataccactcccagattcaaccttaggctgccgcgtacgtgtgcca
ttcgggaaacgtgagctgatcggtgtagtcgtcgaacttccatcagccgaaatgtcagta
ccattacgcgaggcattcgcctggattgaccgtataccaattctagatggcgagctggca
caatcgttacagtggctgtcacactacacgcataccccactaggtgagatattagctacg
gctcttcccgggctgttacgtcatggtaaacccttaccagagacctggacctgctgggct
tggcgtctaaccgaaaccgggcgcactgccgctcccaagctgcgtcgcaacagccgctca
gcacaaatggctgaattactcaccgccagtgatcaaacggaagatgcacttaacactcgg
atgaatcgctggcgcgcagttgcacacaacctaaccaagcgtggttatgtcgaacgcatc
aagaaacctacaacggtacctgtaatcatccagaccacaagcaacaccgtacctgtactc
aacactgaacaacagaaagcagttgagacactaaacgctaacgtaggcttcaaaacttat
cttctagatggagtcaccggcagcggtaaaacagaagtctacctacaagccatcgctacc
tgcttagctgcgagtaaacaagcattggtcttagtccctgagatcggcttgacacctcaa
cttctaaccaacttccatgcccgcctcggaatacccgtgcatgccctgcactctaaattg
gcagacagcgaacgcgcccgcgtgtgggcgacggcacgatgtggcgaggcacgactggta
ctaggaacccgctcagcggtgttcacccccctacctaatgccggactaattatagtagat
gaggaacacgacacgagttacaagcagcaagacgggatacgttacaacgcgcgcgatttc
gcattggtgcgcggcaaggcactgaacgtaccggtcatcctcgggagtgccactccgtca
ctggaatcactgtacaacgcgcataacggacgctacaagcacctccgcctcagctaccgt
gccggtcaagcgtatgcccctcaggtgcgcgtactagacgtgcgcaaaagaccactgaaa
gacggcctatcacccgaggtattaacaggaattaacgcaactttagcgcgtgatgagcag
gtactcgtattcaagaaccggtgcggctattcaccagtgttgctatgtcacgactgcggc
tggaccgctacctgtcaccagtgcagtacatcagtgcaccacacaccaatgactgtatac
agcggcggaacctatttacagtgccaccactgcggcgcacgccagccaatgccactatca
tgcccagactgcggcagtacagcgctacagccacagggcataggcaccgaacgcctagaa
gctcgcctgattgaggctttccctaaacatcctgtggtgcgtattgatcgcaacacaacc
aagcaccgcgacggactaaaaacccaattcaccaaactcggcaatgccgctggcatttta
gtaggcacacagattctagccaaagggcatcacctaccacgcttaacgatggtcgtggtc
gttggaatcgacgaaggcctattctcagccgacttccgtgccactgaaaagctctcccag
caactgatccaagttgctggccgcgctggccgtgctaaacacgccggagaagtctggcta
caaactcaccaccctgatcaccctctgttgcaaacactaatcaacggcggctaccacacc
tttgctaatacggagctacaacaacgccaagccgcttggttaccaccattcgcacacttg
gcactcctgcgtgctgaagcgaaagacacaacctcaacacaacagtttctcaccacgata
cgcaaacacatgccaaccaacaatgcagtcgaatgctacggcccaatgtcggctcccatg
ccgcgccgcgccggctacgagcgctaccaattattgctgtccagctcccaacgtaacgca
ctacaccgcacactcaatgtcttgataccagcaattcatgcactgccagaagcacgccga
gtccgctggtcgttagacgtggatccagttgatctttactaa
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