Xylella fastidiosa subsp. fastidiosa GB514: XFLM_04745
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Entry
XFLM_04745 CDS
T01979
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
xff
Xylella fastidiosa subsp. fastidiosa GB514
Brite
KEGG Orthology (KO) [BR:
xff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xff03021
]
XFLM_04745
Transcription machinery [BR:
xff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XFLM_04745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_3
Sigma70_r1_2
IF2_N
HTH_11
HTH_10
HTH_25
GntR
KORA
Phage_terminase
HTH_PafC
UCR_14kD
HTH_DeoR
Motif
Other DBs
NCBI-ProteinID:
ADN62911
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Position
complement(1015303..1016151)
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AA seq
282 aa
AA seq
DB search
MVLVGNNFPVPNALGSLEAYISAVHQISVLSVDEEQLLARRYRDQQDLDAARELVHSHLR
FVVRVARGYSGYGLSLGDLIQEGNIGLMKAVKRFDPDMGVRLVSFAMHWIRAEMHEFILK
NWRIVKVATTKAQRKLFFNLRKSRTRLGWMNAEEVSAVARDLNVSEREVLEMESRLSGRD
IGFDAPEEDNAPPSPVGYLIANDGDPSQAYERGNSEETQLRLLQEGLSVLDTRSRDIIQR
RWLETDKKITLQELAEEYGVSAERIRQIEANALKKMKVLFAA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttgtgggaaacaactttcctgttccaaatgccctcggttcgttggaggcatac
atcagtgccgtgcaccagatatcggtactttcggttgatgaggagcagctattggctcgc
cgttatcgtgatcaacaggatttagatgctgcacgtgagttggtgcattcgcacttgcgt
tttgttgttcgggtagcgcgcggttatagcggttacggcctgtctttaggcgacttaata
caagagggtaatatcggtctgatgaaagctgtaaagcgctttgatccggatatgggtgtc
cgtttggtttcttttgcaatgcattggattcgcgctgaaatgcatgagtttattttgaag
aattggcgcatcgttaaagttgctaccaccaaagcgcagcgaaagctgttttttaacctt
cggaaatctagaacccgtctgggctggatgaatgccgaggaagttagtgcagttgctagg
gatcttaacgtctccgaacgtgaggtattggagatggagtcacgtttgtcagggcgcgat
attggtttcgacgcgccggaggaagacaacgctccgccatcgcctgttggctacttgatt
gctaatgatggagatccttctcaagcttacgaacgtggtaatagtgaggaaacccaatta
cgcctattgcaggaaggtttgtctgtccttgatacccgttcgcgcgatattattcagcgt
cgctggctggaaacagataagaaaatcacgttgcaagaattagctgaagaatatggagtt
tcagcagaacgtattcggcagattgaagctaatgcgcttaaaaaaatgaaggtgctgttc
gctgcttga
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