Xylella fastidiosa subsp. fastidiosa GB514: XFLM_06260
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Entry
XFLM_06260 CDS
T01979
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xff
Xylella fastidiosa subsp. fastidiosa GB514
Brite
KEGG Orthology (KO) [BR:
xff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xff03016
]
XFLM_06260 (truB)
Enzymes [BR:
xff01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
XFLM_06260 (truB)
Transfer RNA biogenesis [BR:
xff03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XFLM_06260 (truB)
Prokaryotic type
XFLM_06260 (truB)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ADN63185
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Position
1367582..1368484
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AA seq
300 aa
AA seq
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MSRISYRRLDGILLLDKPAGISSNSALQVARRLLRAKKGGHTGSLDPLATGLLPLCFGEA
TKIAGLLLDSTKAYDADVLLGTTTTTDDAEGAVLLTRPVPTLDAEMVDALIPQLIGRIRQ
RAPIYSALKQGGEPLYAKARRGEVVNAPVREVEVHAIELLFLATPRLQLRVTCGSGTYIR
SLVRDLGEILGCGAHINALRRRWVAPFQIPKMLTLDALEQALSAGRDPDSLLLPLVEGLA
GFPALELDAQRLACFRLGQRLRDHSFQTGRVAVFSRDGIPAGLGEVDSEGLLVPQRLFNL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcatttcctatcgtcgtttggatggtattttgctgcttgataagccagctggc
ataagttctaacagtgcgttacaggtcgcgcgtcggttattgcgtgctaaaaaggggggg
catactggtagcttggatccactcgctactggattgttgccgctgtgttttggagaagcc
accaaaatcgctggtttgctactggattctaccaaggcatacgacgctgacgtgctactc
ggcaccacgacgacgacggatgatgctgaaggggctgtattacttacgcgccctgtgccg
acgttagatgccgaaatggttgatgctcttatacctcaattgattggtcggattaggcaa
cgtgccccaatctattctgctctcaaacaggggggtgaacctttatatgctaaagctcgg
cgtggtgaagtggtcaatgccccggtacgtgaggttgaggtgcatgcgatcgaattgctt
tttttggctacgccgcgattacaattacgtgtgacttgcggttcgggtacatatattcgt
agcctagttcgtgatttgggcgaaatcttgggctgcggcgcacatatcaatgcattgcgc
cgtcgttgggtcgctccatttcagataccgaagatgttgacgttggatgcattggagcag
gcattgagtgcagggagagatcctgattctctgttattgccattggttgaaggattagcc
ggtttcccagcgctggaacttgatgcccagcgtctagcttgcttcaggctagggcagcgc
ttgcgcgatcatagttttcagactgggcgggttgcggtgttcagtcgagatggtatccct
gcggggctgggggaggtggatagtgaaggcttgttggtgccgcagcgtcttttcaatctt
tga
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