Xylella fastidiosa subsp. fastidiosa GB514: XFLM_07370
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Entry
XFLM_07370 CDS
T01979
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xff
Xylella fastidiosa subsp. fastidiosa GB514
Pathway
xff03030
DNA replication
xff03410
Base excision repair
xff03420
Nucleotide excision repair
xff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XFLM_07370
03410 Base excision repair
XFLM_07370
03420 Nucleotide excision repair
XFLM_07370
03440 Homologous recombination
XFLM_07370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xff03032
]
XFLM_07370
03400 DNA repair and recombination proteins [BR:
xff03400
]
XFLM_07370
Enzymes [BR:
xff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XFLM_07370
DNA replication proteins [BR:
xff03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
XFLM_07370
DNA repair and recombination proteins [BR:
xff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
XFLM_07370
NER (nucleotide excision repair)
GGR (global genome repair) factors
XFLM_07370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ADN63388
LinkDB
All DBs
Position
1600124..1602895
Genome browser
AA seq
923 aa
AA seq
DB search
MSKLVLIDGSSYLYRAFHALPPLSNAAGEPTGALFGVVNMLRTTLKERPDYAAFVIDAPG
KTFRDALDSEYKMHRPPMPDDLRMQVEPMRGIVHALGIDILCIDGVEADDVIGTLALAAV
ADGIAVTISTGDKDFAQLVRPGVELVNTMTGSRMDSAMAVINKFGVAPDQIIDFLALMGD
SVDNVPGVDKCGPKTAAKWLAEYGSLDAVIANADKIKGKIGDNLRVVLPRLLLNRALITI
KTDVVLEKRPQDLALRERDTEALRDFYQRYGFTQALKELDGGSVAVTVAEQEPGRGRNAG
FHVAPDASVAMEINPALSASGEYETIFTIEQLQDWIVRLRVAGQFALDTETDSLDPMQAV
LIGLSFASEVGCAAYLPFGHDYPGAPVQLDRGQALALLQPLLEDAAVRKVGQHGKYDMHV
LRRYGIVLAGYADDTLLESFVLTSGHARHDMDTLARRHLGYETMKYVDLVGKGAKQIPFS
HVGVQEATQYAAEDADITLRLHCVLAPKLLAEPRLERVYREIEMPLVAVLERIEANGVQI
DAEELYKQSADLSRRMVIAQQKAMDLAGRHFNLDSPKQLQVLLFDELKLPVVVKTPKGQP
STNEEALEAIVDQHALPRVILEYRSLAKLRNTYTEKLPEMIHPHTGRVHTNYHQAGAATG
RLSSSDPNLQNIPIRTDDGRRIRRAFVAPSGRKLIACDYSQIELRIMAHLSGDAGLVDAF
ESGVDVHCAIAAEVFGRGIDEVTPNERRAAKAINFGLIYGMSAFGLARQLGISRGEAQDY
IALYFDRFAGVRDFMENTRQQARDRGYVETVFGRRLYLNSIASGNQTQRAGAERAAINAP
MQGTAADIIKRAMVAVDGWLGVGGHRERALMILQVHDELVFEADEGFVPTLVHEVSARMA
AAAQLRVPLVVDVGVGHHWDEAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattagttttaattgatgggtccagttacctttatcgtgcgtttcacgcattg
ccgccgctcagtaatgcagcaggtgaacctaccggtgcgttgttcggtgtggtcaacatg
ttgcgtactacattgaaggagcgcccggactatgctgctttcgtgattgatgctccagga
aagacgtttcgcgatgctcttgattccgaatacaaaatgcatcgtccgcctatgcctgat
gatttgcgtatgcaggtggagccgatgcgtgggattgtgcatgcgttaggtatcgatatt
ttgtgtatcgatggggtggaggctgatgatgtgatcggcacattagctttagctgccgtt
gctgatgggattgcggtgacaatttctacgggtgataaggacttcgctcagttggtgcgt
ccaggtgtggagttggtcaacacaatgactggtagtcggatggactcggctatggcagtg
atcaataaattcggcgttgctccggatcagattattgattttttggcgttgatgggtgat
tcggtggataacgtgcctggtgtggataaatgcgggccgaagacagcagcgaagtggttg
gctgagtatggttcactggatgcggtgattgccaatgcggacaagatcaaggggaaaatt
ggtgacaatctgcgtgttgtgctgccacgacttttgttaaatcgtgcgctgattacaatc
aagactgatgtggtattggagaagcgcccgcaggatttggcgctgcgtgagcgtgatact
gaagcgctgcgtgatttttatcagcggtatggcttcacacaggcattgaaggaactcgat
ggtggtagcgttgcagtcactgtggctgagcaggaacctgggcgtgggcgaaatgcgggt
ttccatgttgctcctgatgcatcggtggcaatggagattaatccggcgttgtctgcgtcc
ggagagtacgagacgattttcacaattgagcagttgcaggattggattgtgcggttgcgg
gtggcaggtcagtttgctttggacactgaaactgacagtctggatccaatgcaagcggtg
ctcattggcctgagttttgcgtcagaagtaggatgtgctgcttatttgccatttggtcat
gattaccctggtgcgccggtgcagcttgatcgcgggcaggcgctggcattactgcaaccg
ctgctggaagatgctgcggtgcgtaaggtgggtcagcatggcaaatatgatatgcatgtg
ctgcgtcgttacggtatcgtgctcgctggttatgccgatgacactctattagaaagtttt
gtacttacttccggtcatgcgcgtcacgatatggatacgttggccaggcgccacctcggt
tacgagacgatgaagtatgttgatctggtgggtaagggagctaagcagattcctttttcg
catgtgggggttcaggaggccactcagtacgctgctgaggatgcggatatcacgttgcgc
ttgcactgtgtgctggcgcccaagttgttggccgagccacgtttggagcgggtctaccgt
gaaatcgaaatgccactggttgcagtgttggagcgcattgaggccaatggtgtgcagatt
gatgcagaggagttgtataagcagagtgctgatttgtcgcggcggatggttattgcgcag
caaaaggcgatggacttggcagggcgtcacttcaacttggattcaccgaaacagttacag
gtgctgttgtttgatgagctgaagttgccagtcgtggtgaagacgcccaaggggcagcca
tcgactaatgaggaggcgttggaggcgattgttgatcagcatgcgttgccgcgtgtcatt
ctggaatatcgcagcttggccaagctgcgcaatacctacactgagaagttgccggagatg
atccatccgcacactgggcgtgtgcataccaattaccatcaggccggtgctgctactggg
aggttgtcttcctcagatcccaatttgcagaatatcccgattcgtacagatgatggtcgc
cgtatccgtcgtgcttttgtggcgccttctgggcgcaagttgattgcttgcgattattcg
cagatcgagttgaggatcatggcgcatctttcaggtgatgcggggcttgttgatgcgttt
gagtctggtgtggatgtgcattgtgctatcgctgcggaggtgttcggtcgtggaattgat
gaggtgacgccgaatgagcgtcgtgcggcgaaggcaatcaattttggcttgatctacggg
atgagtgcgtttggcttggcgcgtcagcttggtatcagccgcggtgaggcgcaggattac
attgccttgtatttcgatcgttttgctggggtgcgtgattttatggaaaacacgcgtcag
caggcgcgtgatagagggtatgtagaaacggtgtttggacgccgtctgtatttgaactcc
attgccagcggtaaccagacgcagcgtgccggtgctgagcgtgcagcgatcaatgcgcca
atgcaggggactgcggccgatatcatcaagcgtgccatggttgcagtggatggttggttg
ggagtgggagggcatcgggagcgtgcactgatgatcttgcaagtacacgatgaattagtg
tttgaggcggatgagggtttcgtgccgacgcttgtacatgaagtgtcggcacgaatggct
gcggcagcgcagttgcgtgtgccgttggttgtcgatgttggcgtaggtcatcactgggat
gaggcgcactga
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