Xylella fastidiosa subsp. fastidiosa GB514: XFLM_08290
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Entry
XFLM_08290 CDS
T01979
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
xff
Xylella fastidiosa subsp. fastidiosa GB514
Pathway
xff00550
Peptidoglycan biosynthesis
xff01100
Metabolic pathways
xff01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
xff00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XFLM_08290
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
XFLM_08290
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xff01011
]
XFLM_08290
Enzymes [BR:
xff01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
XFLM_08290
Peptidoglycan biosynthesis and degradation proteins [BR:
xff01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
XFLM_08290
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
ADN63562
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Position
1807229..1809292
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AA seq
687 aa
AA seq
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MSVHHPQAKHTYAEVEQFRRRALLSLFVVVVCLFGLVGWYFKLQVLDHEIYATRSDANRI
KLHPVVPGRGMIYDRDGRLLADNVPAFRLDVMPDKVADMEAMLVELGKVIPLSEDELERF
HRERKVRRRFMPVTLKLRMSEEEMARFAVDRWRFPGVELEPYFTRRYLYSDLFAHVIGYV
GRIDEKDLETLNGGDAALTYIGKSGLERYYEQVLRGKIGYQQIETNVQGRAIRSLGRVTA
QAGADLRLSIDADLQRAMVAAFGQYEGAAVAMDPRSGEILGMVSLPSYDPNLFVNGISHA
QFNALNANPSRPQFNRLVSGGVAPGSTLKPLIALAGLDAGVRRPEDRILSTGMFYLPGVN
RGWGDSHRGGHGWTDLRKSIAQSVNTYYYKLALDLGIERFTDYMRRYGLGQLTGVDLTGE
ISGILPSLEYKRKVRKQAWYQGDTVNVSIGQGDWKVTLLQLVRSVAGLASGHMNRPHLVV
AERAAFSQPWQVLPQPPSQPISSNPGHVQVVREGMIDTMRPGGTGYQAAIGAPYSIAGKT
GTAQVASRKGEAAVDPRNLPMHLRHRALFVGFAPADNPTIAVAVAVEGGGYGASTAAPIA
RKIFDAWLLGKLPEGLEPLDSARGRTAIGLTQFDMTVAGVCEAGNRAALQLGEIQVSVAG
GMLNSTAMMPVAPRAPVTLDSLPEEDP
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcatcatccacaagcaaagcatacgtatgccgaagttgagcagtttcgccgc
cgtgctttgctgagcttgtttgttgtagtggtgtgtctgtttggtttggttggctggtac
ttcaagttgcaggtgcttgatcatgagatctatgcgactcgttctgacgccaatcggatc
aaattgcatccagtcgtgccagggcgcggaatgatatatgaccgggacggacgccttttg
gcggataacgtgcctgcattccgattggacgtgatgccggataaggttgccgacatggaa
gcaatgcttgttgaactgggaaaggtgatcccgctttcagaggatgaactggagcgtttt
caccgtgagcgtaaggtgcgtcgaagatttatgccggtgacattgaagctgcgcatgagt
gaggaggagatggcgcgttttgcagttgatcggtggcgttttcctggtgtggagttggaa
ccctatttcactcgccgttatctttatagcgacttgtttgctcacgtgatcggctatgtc
ggtcgtatcgacgaaaaggacttggagacgctgaacggtggggatgctgcattgacctac
atcggtaaatcgggcctggagcgctactacgagcaggtgttgcgtggcaagatcggttat
cagcaaatcgaaacaaatgtgcaaggacgtgcgattcgcagtctgggacgggtaacggca
caagcgggtgccgacttgcggttgtcgattgacgctgacttgcagcgtgcgatggtcgct
gcgtttggtcaatatgaaggtgcggcggtggcgatggatccgcgcagcggggaaattctg
gggatggtgagtttacccagctacgatcccaatttatttgttaatggcatttctcatgct
caattcaatgcgcttaatgcgaatccttcgcgaccgcaatttaaccgtttggtctctggc
ggcgtggctcctggttctacactcaaacccttgattgcgttggctggattggatgccggc
gtgcgtcgtcccgaggaccggattctttccaccggtatgttctacctgcccggtgtcaat
cggggttggggagattcgcatcgtggtggtcatggttggactgatttgcgtaaatcgatc
gcacagtcggttaatacttactactataaattagcgttggatctgggcattgagcgcttc
accgactacatgcgtcgctatggcctcggtcagctcaccggggtcgatttgaccggagag
attagcggtattctcccttccctcgaatataagcgtaaggtgcgtaagcaggcttggtat
cagggagatacggtcaatgtttcgattgggcagggagactggaaagtgaccctgcttcag
ttagtacgtagcgttgctggcttggccagtggtcacatgaaccgcccgcacttggtggtg
gccgagcgtgccgccttcagccagccgtggcaggtgttgccgcaaccgccatcacagcca
attagctcgaacccggggcatgtgcaggtggtacgtgaagggatgatagataccatgcgt
cctggagggaccggctaccaagctgcgattggtgcaccttattcgattgctggcaaaaca
ggcactgcgcaagttgccagccgtaagggggaggctgccgttgatccgcgcaacttacca
atgcatttgcgtcatcgtgcgttattcgttggttttgctcctgctgataatccgacgatt
gcggttgcggttgcggtcgagggcggcgggtatggtgctagcactgctgcacccattgca
cgcaagatttttgatgcttggttgctaggcaagttgccagagggcttggagcctttggac
agtgcgcgaggtcgtaccgcgattggtttgactcagtttgatatgactgttgccggggta
tgcgaagctggaaaccgtgctgccttgcaactgggagaaatacaggtttcggttgctggt
ggaatgctaaattcaaccgccatgatgccggttgcgccacgtgcgccagtgactctcgac
tcattgccggaggaagacccttga
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