Xylella fastidiosa Hib4: XFHB_00355
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Entry
XFHB_00355 CDS
T04925
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
xfh
Xylella fastidiosa Hib4
Pathway
xfh02024
Quorum sensing
xfh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xfh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XFHB_00355 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XFHB_00355 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xfh03019
]
XFHB_00355 (hfq)
03036 Chromosome and associated proteins [BR:
xfh03036
]
XFHB_00355 (hfq)
Messenger RNA biogenesis [BR:
xfh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
XFHB_00355 (hfq)
Chromosome and associated proteins [BR:
xfh03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
XFHB_00355 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ALR05560
UniProt:
A0ABC8AAR5
LinkDB
All DBs
Position
complement(88100..88378)
Genome browser
AA seq
92 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGTIESFDQFVVLLRNTVSQMVYKHAIS
TVVPARNVRVGPGGGYVQSGSDTLQINDDEVE
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaggatccttttctaaacgcattgcgtcgcgaacgggta
cctgtgtcgatctatctagtgaatggcatcaaactacaaggcacaatcgaatcattcgat
caatttgtggttctactacgtaatactgtcagccagatggtgtacaagcatgctatttcc
acagtggtacctgcgcgcaacgtacgagttgggccaggtggaggctatgtgcagtcaggc
agtgatacgttgcaaattaacgatgacgaagtggaatga
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