Xylella fastidiosa Hib4: XFHB_00460
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Entry
XFHB_00460 CDS
T04925
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
xfh
Xylella fastidiosa Hib4
Pathway
xfh00300
Lysine biosynthesis
xfh01100
Metabolic pathways
xfh01120
Microbial metabolism in diverse environments
xfh01230
Biosynthesis of amino acids
Module
xfh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xfh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XFHB_00460
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xfh01002
]
XFHB_00460
Enzymes [BR:
xfh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
XFHB_00460
Peptidases and inhibitors [BR:
xfh01002
]
Metallo peptidases
Family M20
XFHB_00460
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
ALR05578
LinkDB
All DBs
Position
110060..111193
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AA seq
377 aa
AA seq
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MSEVFDLTCDLISRPSVTPEDAGCQAMIAARLERVGFTCEHLRYGAVANLWATHGQGAPV
LVLLGHTDVVPPGPMEAWTSDPFIPQRREGKLYGRGAADMKGSVAAFVIAAERFLVAHPG
HPGTLAILLTSDEEGEAIDGVRKVAETLRQRGQGIDWCLTGEPSSSKRLGDLLRVGRRGS
LSATLHVKGVQGHVAYPHQARNPIHLVVPALAALTARHWDDGDESFPSTSLQISNIHAGT
GANNVIPGALEVAFNLRYNPHWSAPRLESEIVALLDQHGLDYTLHWHRSGEPFYTPEGKL
RRIAREVLERFSGVPPEESTGGGTSDARFIAPLGAQCIEIGPVNASIHQVDEHVCLADLE
ALPDLYQSLIERLLADH
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagtgtttgacctgacctgtgatctgatctccaggccttccgtgacaccagaa
gatgccggctgccaagccatgattgcagcgcgtctagagcgtgtcggcttcacctgtgaa
cacctgcgttacggtgccgtcgccaacctatgggccacacatggacagggtgcgccggtg
ctagtgctactgggtcacacggatgtggtccctcccggtccaatggaagcgtggacttcg
gacccgtttatcccacagcgacgcgaaggcaagctctacggacgtggcgctgcggatatg
aaaggcagtgtggctgcattcgtgattgctgcagagcgcttcttagtcgcccatcctggg
catcccggaaccttggcgatcttactgacctctgatgaagagggcgaagcaatagatggt
gtccgtaaggtggccgagacgttacgccagcgtggtcagggtatcgattggtgcttgact
ggcgaaccgtcttcgagcaagcgactgggtgacctgctgcgggttggccgccgtggcagt
ctgtcggcaacgcttcacgtgaagggcgtccagggacatgttgcctatccccatcaagca
cgcaaccccattcacctcgtcgtacctgcgctcgctgcattgacggcgcggcattgggat
gacggtgatgaatccttcccgtcaaccagcttgcagatcagcaatatccacgctggaacc
ggtgccaacaacgtgattcctggtgcactggaggttgccttcaatctgcgttacaacccg
cattggagcgccccgcgcttggagagtgagatcgtcgcattactcgatcaacacgggctg
gactataccttgcactggcatcgtagcggtgagccgttctataccccggaaggaaaatta
cgtcgcatcgcacgtgaagtattagagcgtttttccggcgtgcctccggaagaaagcacg
ggcggcggcacgtccgatgcgcgttttattgccccactgggcgcgcaatgtatcgagatt
ggaccggtcaacgccagcattcaccaggttgatgagcatgtgtgcctggccgacttggag
gccctgccagacctgtaccagtcgctgattgagcggttgcttgctgaccattga
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