KEGG   Xylella fastidiosa Hib4: XFHB_00925
Entry
XFHB_00925        CDS       T04925                                 
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
xfh  Xylella fastidiosa Hib4
Pathway
xfh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xfh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    XFHB_00925 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xfh03019]
    XFHB_00925 (pcnB)
Enzymes [BR:xfh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     XFHB_00925 (pcnB)
Messenger RNA biogenesis [BR:xfh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     XFHB_00925 (pcnB)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_arg_C PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: ALR05655
UniProt: A0ABC8ABD6
LinkDB
Position
233437..234702
AA seq 421 aa
MLCIVPRGHHTISRKDISPNALRVLYSLREAGFGAYLVGGAVRDLLVGGHPKDFDLATDA
TPEQIKQLFRSCRLIGRRFRLAHVVFGREIIEVATFRANSDDGSGDRELENGRLVCDNVY
GTIEDDATRRDFTCNALYYTIEDFSVRDYVGGFEDVQSRLMRLIGDPVRRYQEDPVRMLR
AVRLAAKLGFEIEAGTAEPISRMAGLLADVAPARLFEEVLKLFLSGHAVASFEALEDFGL
IDVLFPESAKALRANRSGALRRVLIEGLHSTDKRVIKDEPVSPAFLFALLLWPGFCHALV
TLQLQGVQPEEAQRRAADRVTLHHLERVALPRRFSLPMQEIWLLQNRFISRQPKRVLRLL
EHPRFRAAFDFLVVRLAASVEHAADVEFWRVAQQQPSEDSLASAIDAVRFESEEVGVSRQ
R
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgctttgcatcgtaccgcgtggacaccatacgatttcacgtaaggacattagtccgaat
gcgttgcgggtgttgtacagcctgcgtgaggcaggtttcggtgcgtatttggttggcggt
gcggttcgtgatttgttggtaggcggtcatcccaaagatttcgacttggctaccgatgca
acacctgagcagatcaagcagttgttccggagttgtcgtttaatcggtcgccgctttcgt
ttggcgcatgtggttttcgggcgcgagattattgaggtcgctaccttccgtgccaatagt
gatgatggaagtggtgatcgtgagctggagaatggccgtttagtgtgtgacaacgtctac
ggtacgattgaggacgatgcgacccgtcgcgatttcacctgtaacgcgctttattacact
atcgaagatttctcagtacgtgactacgttggtggttttgaggatgtccagtcgcggctg
atgagattgattggcgatccggtgcgacgttatcaggaagatccagtgcgcatgctgcgt
gcggtgcgtttagcagcgaagctcggtttcgagattgaggctggtaccgccgagccaatt
tcgcgtatggctggattgttggctgacgtggcaccagcccgtttgtttgaggaagtgctc
aagctatttctctcaggacatgctgtggccagtttcgaggccttagaggattttggtctg
attgatgtgttgtttcccgagagcgctaaggcattgcgtgctaaccgtagtggtgcattg
cggcgggtattgatcgaagggctgcacagtactgataagcgggtgattaaagatgaacca
gtgtcgccggcattcttgttcgcattgttgttatggcctggtttttgccatgcgttggtc
acgttgcaattgcagggtgtgcagccagaggaggcacaacgtcgcgcagctgatcgggtg
acgttgcatcatcttgagcgtgtcgctttgccgcgccgtttttctttgccgatgcaagag
atttggttgttgcaaaaccgttttatttcacgccagcctaagcgtgtcttacggcttctg
gaacatccgcgctttcgtgctgccttcgatttcctggtagtgcgtttggcggcttctgtt
gagcatgctgcagacgtggagttttggcgtgtggcacaacagcagccttctgaagactct
ctggcgtcagccattgatgctgtgcggtttgaatcggaggaagtgggtgtgtcgcgtcag
cggtaa

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