Xylella fastidiosa Hib4: XFHB_00985
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Entry
XFHB_00985 CDS
T04925
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xfh
Xylella fastidiosa Hib4
Brite
KEGG Orthology (KO) [BR:
xfh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xfh03016
]
XFHB_00985 (truB)
Enzymes [BR:
xfh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
XFHB_00985 (truB)
Transfer RNA biogenesis [BR:
xfh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XFHB_00985 (truB)
Prokaryotic type
XFHB_00985 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ALR05665
UniProt:
A0ABC8AB80
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All DBs
Position
246474..247376
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AA seq
300 aa
AA seq
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MSRIAYCRLDGILLLDKPAGISSNSALQIARRLLRAKKGGHTGSLDPLATGLLPLCFGEA
TKIAGLLLGSTKAYDADVLLGTTTTTDDAEGAVLLTRPVPTLDAEMVDAVIPQLIGRIRQ
RAPIYSALKQGGEPLYAKARRGEVVNAPVREVEVHAIELLVLATPRLQLRVTCGSGTYIR
SLVRDLGEILGCGAHITALRRRWVAPFQIPKMLTLDALEQALSAGRDPDSLLLPLVEGLA
GFPALELDAQRLACFRLGQRLRDHSFQTGRVAVFSRDGIPAGLGEVDSEGLLVPQRLFNL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcattgcctattgtcgtttggatggtattttgctgcttgataagccagctggc
ataagttctaacagtgcgttacagatcgcgcgtcggttattgcgtgctaaaaaggggggg
catactggtagcttggatccactcgctactggattgttgccgctgtgttttggagaagcc
accaaaatcgctggtttgctattgggttctactaaggcatacgacgctgacgtgctactc
ggcaccacgacgacgactgatgatgctgaaggggctgtgttacttacgcgccctgtgccg
acgttggatgccgaaatggttgatgccgtgatacctcaattgattggtcgaattaggcaa
cgtgccccaatctattctgctctcaaacaggggggtgaacctttatatgctaaagctcgg
cgtggtgaagtggtcaatgccccggtacgtgaggttgaggtgcatgcgatcgaattgctt
gttttggctacgccgcgattacaattacgtgtgacttgcggttcgggtacatatatccgt
agcctagttcgcgatttgggcgaaatcttgggctgcggcgcacatatcactgcattgcgc
cgtcgttgggtcgctccatttcagataccgaagatgttgacattggatgcattggagcag
gcattgagtgcagggagagatcctgattctttgttattgccattggttgaaggattagct
ggtttcccagcgctggagcttgatgcccagcgtctagcttgcttcaggctagggcagcgc
ttgcgcgatcatagtttccagactgggcgggttgcggtgttcagtcgagatggtatccct
gcggggctgggagaggtggatagtgaaggcttgttggtgccgcagcgtcttttcaatctt
tga
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