Xylella fastidiosa Hib4: XFHB_02475
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Entry
XFHB_02475 CDS
T04925
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
xfh
Xylella fastidiosa Hib4
Pathway
xfh00051
Fructose and mannose metabolism
xfh00541
Biosynthesis of various nucleotide sugars
xfh01100
Metabolic pathways
xfh01250
Biosynthesis of nucleotide sugars
Module
xfh_M01019
GDP-6-deoxy-Tal biosynthesis, GDP-Man => GDP-6-deoxy-Tal
Brite
KEGG Orthology (KO) [BR:
xfh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
XFHB_02475 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
XFHB_02475 (gmd)
Enzymes [BR:
xfh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
XFHB_02475 (gmd)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ALR05906
UniProt:
A0ABC8ABY7
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Position
580973..582013
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AA seq
346 aa
AA seq
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MSNKSAVITGITGQDGAYLAQLLLEMGYVVYGTYRRSSSLNFWRINELGIAQHPKLHLVE
YDLTDLSSSVRLLELAAPKEVYNLAAQSFVGVSFDQPLTTTDITGVGAVNLLEAIRIVNP
KIRFYQASTSEMFGKVQQTPQIEETPFYPRSPYGIAKLYAHWMTVNYRESYGIFAASGIL
FNHESPLRARDFVTRKITHAIAMIKLGKLDVLELGNLDAKRDWGFAKEYVEGMWRMLQAD
EPDTFVLATNRTETVRDFVSLAASAVDIQLEWKGQAERECGVDVASGKTLVTINPKFYRP
AEVDLLIGNPAKARTKLGWEPKTTLEELCHMMMEADVRRSERDFLF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataaaagcgcggtcattacgggtattacaggacaggatggagcttatttagcg
cagttgcttctcgaaatgggttatgtggtttatggtacgtatcgccgttctagctcattg
aacttctggcgtattaatgaacttgggattgcacagcatcccaagttacatctggtcgaa
tatgatttgaccgatctctcttcgagtgtgcgactgctcgaattagccgctcctaaggag
gtctataatcttgccgcacagagctttgttggcgtctcttttgaccagccattgaccacg
acggacattaccggagtgggtgcggttaacctgttggaagccattcggattgttaatcct
aagattcgcttctatcaggcatcgacttctgagatgtttggaaaagtccagcagactccg
cagattgaggaaacacctttctatccgcgtagcccatacggtattgccaagttgtacgct
cattggatgacggttaattatcgtgagtcgtacggtatctttgctgctagtggtattttg
tttaatcacgaatcgccgttgcgagcgcgtgattttgtcactcgtaaaatcactcatgcg
attgccatgattaaattagggaagctagacgtattggagcttggtaatttggatgccaaa
cgtgattggggttttgcgaaggaatatgttgagggaatgtggcgtatgcttcaggctgat
gagccagatactttcgtgctggcaaccaaccgaactgaaactgtgcgtgatttcgtcagc
ttggctgccagtgccgttgatatccagttggagtggaagggacaagccgaacgggaatgt
ggtgttgatgttgcatcgggaaaaactttagtcacaatcaatcctaagttttatcggccg
gcggaagtggatttgttgatcggtaatccggccaaagctagaacgaagctgggttgggaa
ccaaagaccacacttgaggagctttgccacatgatgatggaagcagatgtgcgccgcagc
gaacgcgatttcctattctaa
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