Xylella fastidiosa Hib4: XFHB_02820
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Entry
XFHB_02820 CDS
T04925
Name
(GenBank) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
xfh
Xylella fastidiosa Hib4
Pathway
xfh00040
Pentose and glucuronate interconversions
xfh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xfh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
XFHB_02820
Enzymes [BR:
xfh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
XFHB_02820
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GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
ALR05957
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Position
650993..652636
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AA seq
547 aa
AA seq
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MNLDRFLPLVFGLHCFAAMGGTADTADVFRVSQPSPSDLSEPVSVKTLWGEVQRPSLPTH
VCTVLPARLTPEHDSLDALDANPRASQPDTKRLQDAIDDCPAGSAVKLVMDSHRKSGFLS
GPLHLKSGVTLWIDDGVTLFASRNPKDYDKGNGTCGTGTSTYEFSCMPLISAINTTSSGI
VGGGVIDGRGGSILTGGKHARQRTWWDLAYQNKHHALHQQVPRLIQIRGGNDFTLYRVAI
ENAPNFHVVADTVSGVTAWGIRILTPSLVYTTPGYHCPPGTTPDVVTPATCFTPDTVKNT
DGFDPGQSNHVLLAYSYISTGDDHVAIKARGKMPSDALSFLHNYFGYGHGMSIGSDTESG
VHDMEVSDLSIDGFDSPNSNGLHMKSDTDHGGVVDHVTYSKICMRRLKRPLAFDTFYKPS
NGNSYPLFKNIVLQDIHVLESPVFGAGQLLFMGILGSGNNLPMTLSLDNVVFDGFLPTLI
APPSSVVFANPQAVHFHFGPGPVSFAPLITPSVAYDVTVSGSPGVGNPYDCSAAFINFSS
VFPDSPI
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttgaccgtttcctccccctagtctttggactgcactgttttgccgcaatgggc
ggcactgctgatactgctgatgtctttcgagtgtcacagccgtccccatccgatctttcc
gagccggtatcggtgaaaacgctctggggcgaggtacaacgtcccagcctacctacccac
gtgtgtacggtattgcccgcgcgcctgactcctgaacatgactcccttgacgcacttgat
gccaatccacgggcctcccagcctgataccaagcgtttacaggatgccattgatgattgt
cccgccggtagcgcggtcaaactagtgatggacagtcatcgcaaatccggctttttgagt
gggccgttgcacttgaaatctggggtgacgttgtggattgacgatggcgtcacgctgttt
gcatcgcgtaaccccaaggattacgacaaaggcaatggtacgtgcggtaccggaacgtca
acctatgagttcagttgtatgccattgatctccgcgatcaacaccaccagtagcggtatc
gtgggcgggggtgtgattgatgggcgtggcggtagcattttgactggcggtaagcatgct
cggcagcgtacctggtgggatctggcctatcagaacaagcaccatgcactgcatcaacag
gtaccacggttgatccaaatcaggggcggtaacgacttcacgttgtaccgtgtcgccatc
gaaaatgcacctaacttccatgtggttgctgatacggtcagtggtgtcaccgcatggggc
atccgtatcctgaccccaagcttggtctataccacgccggggtaccactgtccgcccggt
accacgccggatgttgtgacgccggcgacatgctttaccccggacacggtcaagaacacc
gatggctttgatcctgggcaatcaaaccacgtgctgctagcgtactcctacatcagcact
ggggatgaccacgttgccatcaaagcgcggggcaagatgccaagcgacgctctgagcttc
ttacacaactactttggctatggacatggcatgtccatcggtagcgacaccgagtcaggt
gtacacgatatggaagtcagtgatttgagtatcgacggctttgacagccctaacagcaat
ggcttgcatatgaaatctgataccgatcatggcggagtggtcgaccatgtcacctactcc
aaaatatgcatgcgtcgtctgaaacgtccgctggcgtttgacaccttctacaaaccttcc
aacgggaattcttatccactcttcaaaaatatcgtgctgcaagatattcatgtgcttgaa
agtcctgtctttggtgctggtcagctgcttttcatggggatcctcggcagtgggaataat
ctgccaatgacgctgagtctggataacgtcgtattcgacggttttttgccaacattgata
gcgcctcccagcagtgtcgtattcgccaatccgcaggcagtgcattttcacttcggtccc
ggtccggtcagtttcgctcctttgattaccccctcggttgcttacgatgtgactgtgagt
ggaagtccaggtgtgggcaacccatacgattgttcggcggcatttatcaatttttccagc
gtatttcctgattcgcctatctaa
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