Xylella fastidiosa Hib4: XFHB_03560
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Entry
XFHB_03560 CDS
T04925
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
xfh
Xylella fastidiosa Hib4
Pathway
xfh00541
Biosynthesis of various nucleotide sugars
xfh01100
Metabolic pathways
xfh01250
Biosynthesis of nucleotide sugars
Module
xfh_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
xfh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
XFHB_03560 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xfh01005
]
XFHB_03560 (kdsB)
Enzymes [BR:
xfh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
XFHB_03560 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
xfh01005
]
Lipid A
XFHB_03560 (kdsB)
SSDB
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
ALR06072
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Position
819268..820041
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AA seq
257 aa
AA seq
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MSLEIVPFVVAIPARFSASRLPGKPLCLLGGRPLIHRVAERALSAGAREVWVATDDVRIA
EAVASLDGVHVAMTANTHLSGSDRLAECARIAGWDPEMCVVNLQGDEPFAPAAGIRAVAA
LLHHSNADMATLATTIDKSEDLFNPNIVKLVCNAHGEALYFSRAPIPWNRDTFATTPEPT
PLGPWLRHIGLYACNAGFLQRFTTMQPGTLEQIESLEQLRVLEAGHRIAVRITPEHFPPG
IDTPEDLAKAEKALEDV
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcgaaatcgtgccttttgtagttgctattcccgcacgtttttccgcatcacga
ctgcctggaaaaccgctgtgcctgcttggtggtcgcccactgattcacagggtagccgag
cgggcacttagcgcaggcgcacgggaagtatgggttgcaaccgacgatgtacgcatcgct
gaggccgttgcttctctggacggtgtccacgtggcgatgaccgcaaacactcacctatcc
ggaagcgaccgcttagccgagtgcgcacgcatcgccggatgggatcctgagatgtgcgtg
gtcaacctacagggcgatgagccgttcgcaccagcggcggggattcgtgctgtagcggca
ttgctgcatcacagcaatgccgacatggcaacgctcgcaacgaccattgacaagagcgaa
gacctgttcaacccgaacatcgtcaaattggtgtgcaatgcacatggagaagcgttgtac
ttcagccgtgccccgatcccatggaatcgggataccttcgccacaacgcctgaaccaacg
ccattgggtccgtggctacgccacatcggtctctatgcctgcaacgctgggttcctgcaa
cgcttcaccacgatgcaaccggggaccctggagcagattgaatcgctggaacaactgcgt
gtgctggaagcagggcatcggatcgcggtcaggatcactccggaacatttcccgcccggt
atcgataccccagaagacttagccaaagccgagaaggcattggaggatgtatga
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