Xylella fastidiosa Hib4: XFHB_04270
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Entry
XFHB_04270 CDS
T04925
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
xfh
Xylella fastidiosa Hib4
Pathway
xfh00300
Lysine biosynthesis
xfh00470
D-Amino acid metabolism
xfh01100
Metabolic pathways
xfh01110
Biosynthesis of secondary metabolites
xfh01120
Microbial metabolism in diverse environments
xfh01230
Biosynthesis of amino acids
Module
xfh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xfh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XFHB_04270
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XFHB_04270
Enzymes [BR:
xfh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
XFHB_04270
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Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
ALR06191
UniProt:
A0ABC8ACN1
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Position
949421..950275
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AA seq
284 aa
AA seq
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MGVESVRRPLHFTKMQGAGNDFVVLDLRDGTPPPDVALVAWLADRHFGIGCDQVIAIEPP
RGVGVVAAYRIWNADGSAAQQCGNGARCVAAWLVRDGSVADEHFLIDSPVQVHLVRCIGK
DEYAVEMGLPVFEPERIPLSGFPNACGEYVLSLQGEVLRCGAVSMGNPHAVVEVDLIDVA
PVERIGSLLQQHVAFPESVNVGFVQVIDPGLVRLRVYERGAGETLACGSGACAAAVVLMQ
RGRVGRDVRVVLPGGTLRVQWPVSGGPVTLSGPAKCVFDGVWYG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgggggttgagagcgtgcgccgtcctttgcatttcaccaagatgcaaggggctggtaat
gacttcgtcgttttggatttgcgtgatgggacgccgccgccggatgtggcgttggtcgct
tggttggctgatcgccactttggtattgggtgtgatcaggtgatcgctattgagccgccg
cgcggtgtcggggtggttgccgcttaccgtatctggaatgcggatgggtctgcggcgcag
caatgtggtaatggtgcacgttgcgtcgctgcttggttggtgcgagatggttccgttgcg
gatgagcatttcttgattgacagtccggtacaggtgcatttggttcgctgcataggtaaa
gatgagtatgcggtggagatgggtctgccagtgttcgaacctgagcgtattcctctgtct
ggatttcctaatgcctgtggagagtatgtgttgtcgctacagggtgaggtgttgcgttgt
ggtgcggtatcaatggggaatccgcatgcagtagttgaggtcgatttgattgatgtggca
ccggtcgaacggatcgggtcgctcttgcagcagcatgttgcgtttccggagtcagtgaat
gtcggttttgtccaggtgattgatcctggtttggtacggttgcgtgtgtatgagcgtggt
gctggagaaacgttggcgtgtggcagtggtgcttgtgcggcggcagttgtgctgatgcag
cgtggcagggttggacgtgatgtgcgcgttgttctaccagggggcacgttgcgtgtgcag
tggccagtttccggtgggccagtgacgttgtctggtccggcaaagtgtgtgtttgatgga
gtgtggtacggatga
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