KEGG   Xylella fastidiosa Hib4: XFHB_04480
Entry
XFHB_04480        CDS       T04925                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
xfh  Xylella fastidiosa Hib4
Pathway
xfh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:xfh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    XFHB_04480 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xfh02044]
    XFHB_04480 (gspD)
Secretion system [BR:xfh02044]
 Type II secretion system
  General secretion pathway protein
   XFHB_04480 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: ALR06224
LinkDB
Position
1000448..1002775
AA seq 775 aa
MISRLLTVSIVTALLGACVTPPSPMIKRNTLLHKHPATTDIPTTQLPDAVGTATVPLPDT
TETPTALLSDAGGPLPVIRRGNGKVINQTVAATPPPSMGVAGKGSATFNFEGESLQAVVK
AILGDMLGQNYFIASGVQGTVTLSTPKPVSSAQALSLLEMVLGWNNARMIYNNGRYSIVQ
ADQALAGTVAPSTAPPAVARGFEVRVVPLKYISASEMKKVLDPYARPNAIVSIDTTRNLI
TLAGTRVELENYLRTVQIFDVDWLSGMSVGVFPIQSGKADKVAADLEKVFGESGKTPSAG
MFRFMPLESANAVLVITPQASYLDQIQKWLDSVDSVGGALSLFSYALKYIKANDLANRLT
EVFGVGARREDSNVSLAPGAQLGVLGSGGSGDSLPSAGGGGSLSAVPSNGGTDNTSSANG
GLGGSTLQLSPRTQGNGSVTLHVQGDTVGVSAVEEINTLLVRATPQAWRSIRDVIEKLDV
MPMQVHIEAQVAEVSLTNQLSYGVNWFFQNSVNAAADAADNGASNGTGIGLGAGLPSAAG
RSGWKSIAGKVTSNGLAWTFLGKNAAAIINALDQVTQVRLLQTPSVFVRNNAEATLNVGA
RIPINSTSINTGLGSNSTYSSVQYIDTGVILKVRPRVTKDGMVFLDIVQEVSTPGSLPAA
CSSASSTLVNSAACNVQINTRRIKTEAAVQSGDTIMLAGLIDSNSGKGSNGVPFLSKVPI
VGGLFGTKAQNNNRREIIVLLTPEIVRNPQEARNLTDEYSQKFNAMEPLPGLNTK
NT seq 2328 nt   +upstreamnt  +downstreamnt
atgatttcgcgtcttttaactgtttcgatagtcactgcccttttgggtgcttgtgttacc
ccaccatcgccgatgattaagcggaatactcttctgcataaacatcctgccactacagac
ataccgacgacacagctccctgacgctgtggggacggccactgtgccgctccctgacact
acggagacgccgactgcgctgctttctgatgctggtggtccgctcccggtgattcgtcgt
ggtaatgggaaagtgattaatcagactgttgctgcaactccaccaccatcaatgggtgtg
gctggaaaaggtagcgctacctttaacttcgaaggagagtcgttgcaggctgtggtcaaa
gccattcttggcgacatgctcgggcaaaactatttcattgcatcgggcgtgcaggggacg
gtgactctctccacacctaagcctgtctcgtcggcacaggcgctgagtctcttggagatg
gtattgggttggaacaacgcacggatgatttataacaatggacgttacagcattgtccag
gccgaccaggcgctagctggtacggttgcgccgagtactgcaccgccggcggttgcccgt
ggctttgaagtccgtgtggtaccactgaagtacatctcggcgagcgagatgaaaaaagtg
cttgatccatacgcacgtcctaatgcgattgtcagcattgatacaacgcgcaacctgatt
acccttgcgggtacccgtgttgagctagagaactatctgcgcactgttcaaattttcgat
gttgattggttgtctggtatgtcggtgggtgtgttcccaattcaatcaggcaaggcggat
aaagttgctgccgatttggaaaaagtgtttggcgagagcggaaaaacgcctagcgccggt
atgttccgttttatgcctctggagagtgctaacgctgttttggtgattaccccacaggct
agttatctggatcagattcagaagtggttggatagtgtcgacagtgttggaggtgctttg
agtttgttctcttacgcgctgaagtacatcaaggccaatgatttagctaatcgtctgacg
gaagtgtttggggtcggtgctaggcgtgaagatagtaatgtgtcgctggctccaggcgcg
caacttggcgtcttgggaagtggcggcagtggcgatagcctgccaagtgctggtggtggc
ggtagcctttctgctgttcccagtaacggagggacggataacacgagcagtgcgaatggt
ggtttagggggcagtacgctccagttgtcaccacgcacccaaggcaatggcagtgtgact
cttcatgtgcagggcgataccgtcggtgtgtcggcggtggaggaaattaataccttgctg
gtccgtgcgactccccaagcgtggagatcgatacgtgatgtgattgagaagcttgatgtg
atgccgatgcaggtacatatcgaagctcaggtcgctgaggtcagcctcaccaaccagctc
agctatggtgtgaattggtttttccagaattctgtaaatgctgctgctgatgcggcggat
aatggcgcttccaacgggacaggcattggcctaggtgcgggcttgcctagtgccgctggg
cgttcggggtggaagagcatcgccggtaaggtcaccagcaatgggttggcttggacgttc
cttggaaagaacgccgcagcgattatcaatgcattggaccaagtcacccaggtccgtttg
ctacagacgccgtcagtattcgtgcgtaacaacgccgaggccacgctcaacgtgggtgcg
cgtattccaatcaattccacctcaattaacaccggtctgggcagtaacagtacctactcc
tcagtgcagtacattgataccggcgtcattttgaaagtgcgtccgcgcgtgactaaggac
ggaatggtgtttttggacatcgtacaggaggtcagcacccctggttcactgccagcggca
tgtagctctgctagttcgacgttggttaacagtgccgcgtgcaatgtccagatcaacaca
cgcaggattaagacggaggcagcggtgcagagtggcgatacgatcatgcttgctggcctg
atcgacagtaatagcggtaaaggcagcaacggggtcccgttcctgagtaaggtgccgata
gtcggtgggttgtttggtacgaaggcgcagaataataatcggcgggaaatcattgtgtta
ctgaccccagagattgtgcgtaaccctcaggaggcgcgtaatcttactgatgaatacagt
caaaaattcaatgcaatggagccattaccaggattgaataccaaatga

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