Xylella fastidiosa Hib4: XFHB_06710
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Entry
XFHB_06710 CDS
T04925
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18306
membrane fusion protein, multidrug efflux system
Organism
xfh
Xylella fastidiosa Hib4
Pathway
xfh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xfh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XFHB_06710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xfh02000
]
XFHB_06710
Transporters [BR:
xfh02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
XFHB_06710
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
YknX_C
BSH_CzcB
RND-MFP_C
Beta-barrel_RND
Biotin_lipoyl
BSH_CusB
Beta-barrel_AprE
BSH_Fcp1
BSH_YknX
HH_MFP_RND
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
ALR07732
LinkDB
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Position
complement(1447731..1448888)
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AA seq
385 aa
AA seq
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MSVSQNSAEQPSASARKASPWKAIVVSVVVVSLIGGGLWYWRTARLSDGGGWAGGGPIDV
VTTTLKAEAAPVSLEALGELRAVRQVTLSAEVAGRVSAISFKPGQRVKAGTVLVQLDDGP
EQADLAAAKAAAAFAQQQFARASELAATGAQSREILQQRQAERDQTAAQVQQLEARIRQK
RIRAPFDGELGLRRIDLGQYLNPGEPAVTLTDLDKLYANFDVPQQELARVKVGQPVHVRI
DTAGIEPVQASISAIEPQVGRDTRNASIQAELENKNRTLQPGMYATVVVVLPAETDALTL
PVSAVMTSASGDAAAVVRDLSPEKTGKAEIVPIVVGRRVGNQVVVARGLKSGDVVITEGQ
LRVRPGADVRVVDKSATNSAPTGGR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcagtcaaaattcggccgagcagccatccgcgtctgctcgcaaagcgtcgcca
tggaaggcgatcgtggtctccgtcgtggtcgtctctttgatcggtggcggcctctggtac
tggcgcacggccaggttgtccgacggcggaggttgggccggcggcggtccgatcgacgtg
gtgaccaccacgctcaaagccgaagccgccccggtcagcctggaggccctgggcgagctg
cgcgcggtccgccaggtaacgctctcggccgaggtcgcgggccgggtctccgcgatttcc
ttcaaaccggggcagcgcgtcaaggcaggcacggtgctggtgcagctcgacgatggtccc
gagcaggccgacctggccgccgccaaggccgcggcagcgttcgctcagcagcaattcgcg
cgagccagtgaattagcggcgaccggcgcccagtcgcgcgagatcctgcagcagcggcag
gccgagcgcgaccagaccgccgcgcaggtgcagcagttggaggcgcgcatacgccagaag
cgcatccgcgcgcctttcgacggtgaactggggttgcgtcgcattgacctgggccagtac
ctcaaccccggtgaacccgccgtaacgctgactgatctggacaagctgtacgccaacttc
gacgtgccacagcaggaactggcacgagtcaaggtcggtcagccggtgcatgtccgcatt
gatacggctggcatcgagccggtgcaggcctcgatcagcgcgatagaaccccaagtaggt
cgcgacacccgcaacgcctccattcaggccgagctggagaacaagaatcgcacgctgcaa
ccaggtatgtacgcgacagtggtcgtggtcctgccagccgagaccgacgcactgacgcta
cccgtctcggccgtcatgacctcggcctctggcgatgccgctgcagtcgtgcgcgatctt
tcccccgagaagaccggcaaggccgagatcgtgcccatcgtcgtggggcggcgagttggc
aatcaggtcgtcgtcgcgcgtggcctgaagtccggcgatgtcgtgattacggaaggccag
ttgcgcgtgcgccctggtgctgacgtgcgtgtggtggacaaatccgccacgaacagcgcg
cccactggtgggaggtaa
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