Xylella fastidiosa Hib4: XFHB_08270
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Entry
XFHB_08270 CDS
T04925
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
xfh
Xylella fastidiosa Hib4
Pathway
xfh03030
DNA replication
xfh03430
Mismatch repair
xfh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xfh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XFHB_08270 (dnaQ)
03430 Mismatch repair
XFHB_08270 (dnaQ)
03440 Homologous recombination
XFHB_08270 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xfh03032
]
XFHB_08270 (dnaQ)
03400 DNA repair and recombination proteins [BR:
xfh03400
]
XFHB_08270 (dnaQ)
Enzymes [BR:
xfh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XFHB_08270 (dnaQ)
DNA replication proteins [BR:
xfh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XFHB_08270 (dnaQ)
DNA repair and recombination proteins [BR:
xfh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XFHB_08270 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ALR06835
UniProt:
A0ABC8AES0
LinkDB
All DBs
Position
complement(1715142..1715861)
Genome browser
AA seq
239 aa
AA seq
DB search
MRNKKRQIVLDTETTGLEWSKGNRIVEIGAVELLDRRLSGDKFHRYLKPDVSFESGAQEV
TGLTMEFLADKPEFSMIADEFLAYINGAELIIHNAAFDLGFLDYELSRLGSQYGKITDCA
SVLDTLVMARERYPGQRNSLDALCKRLGVDNAHRQLHGALLDAQILADVYIALTSGQEEI
GFALPESSRGGVDAASVAFMPDVLLTRPCVVVSQSELEAHEARLAKLRKIAGHVLWDAI
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaggaataagaagcgtcagattgttcttgatactgagaccactggcctggaatggagc
aaggggaaccgcattgtggagatcggtgcggtcgaactgcttgatcgccggctcagtggg
gacaaatttcatcgttatctcaagcctgatgtgtcgtttgagtccggtgcccaggaggta
acggggctgacgatggagtttctagcggacaagccagagttcagcatgattgccgatgag
tttttggcttatatcaatggtgccgaactgattattcacaatgcggcgttcgatctggga
ttccttgattacgagttatcgcggttgggttcgcagtacgggaaaatcacagattgtgcc
agcgtacttgatactttggtgatggctcgggagcgttatccgggtcagcgtaattcactg
gatgcattatgtaagcgtcttggtgtggataatgcccaccgtcagttacatggtgcatta
cttgacgcgcagatattggccgatgtttatatcgcgttgacctctggacaagaggagatt
ggttttgcgttgcctgagagcagccgtggtggtgtcgatgccgctagcgtggcatttatg
ccggatgtgttgttaacacgtccatgtgtggtggtgtcgcaatccgaactggaagcgcat
gaggcgcgtttggccaagttgcgtaagatcgctggtcatgtgctgtgggatgcgatatag
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