Xylella fastidiosa Hib4: XFHB_09260
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Entry
XFHB_09260 CDS
T04925
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
xfh
Xylella fastidiosa Hib4
Pathway
xfh00541
Biosynthesis of various nucleotide sugars
xfh01100
Metabolic pathways
xfh01250
Biosynthesis of nucleotide sugars
Module
xfh_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
xfh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
XFHB_09260 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xfh01005
]
XFHB_09260 (kdsA)
Enzymes [BR:
xfh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
XFHB_09260 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
xfh01005
]
Lipid A
XFHB_09260 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ALR07780
UniProt:
A0ABC8AHA5
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All DBs
Position
complement(1947491..1948321)
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AA seq
276 aa
AA seq
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MKLCGFEVGLNQPLFLIAGPCVIESLQLQLDTAGVLKEITSKLGLNFIFKSSFDKANRTS
GSSFRGPGLEEGLKVLEAVKTQIGVPVLTDVHEYTPIDEVATVVDVLQTPAFLVRQTDFI
RNVCAVGKPVNIKKGQFLSPWDMKPVVEKAKSTGNSQILVCERGASFGYNNLVSDMRSLA
VMRETGCPVVFDATHSVQLPGAQGGRSGGQREFVPVLARAAVAVGISGLFAETHPDPPNA
LSDGPNAWPLHTMAMLLETLVELDAVTKKRGFLEQD
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttgtggttttgaagtcggtcttaaccagccacttttcctgattgccggtcct
tgtgtgattgagtcgctacagttgcagttagatactgccggtgtactgaaggagatcact
tctaagcttggtttgaactttatctttaagtccagttttgataaggcgaaccgaacttcg
gggagtagttttcgtggccctggtttggaagaaggattgaaggtattggaggcggtgaag
acgcagattggggtgccagtactgacggatgtgcacgagtacacaccaatagacgaggta
gccactgttgttgatgtgctgcaaacgccagcgtttttggtacgtcagactgatttcata
cggaatgtctgtgcggtcggtaaaccggtcaacatcaagaagggacagtttttgtcgcca
tgggatatgaaacctgtggttgagaaagcaaagtcgacgggtaattcgcagattcttgta
tgtgaacgcggcgcttcgttcggttacaacaacttggttagcgatatgcgttcactggcg
gtgatgcgcgagaccggctgtccggtggtattcgacgcgactcattctgtgcaacttccg
ggtgctcagggtggtcgttccggtgggcaacgcgagttcgtaccggtgttggcgagggcg
gctgtggcggtgggtatttccggattgttcgctgagactcacccagacccacccaatgca
ttgtctgatggccccaatgcttggccgttgcacacaatggcgatgttgctggaaaccttg
gtggagttggatgcggtcaccaaaaaacgaggtttccttgagcaggattga
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