KEGG   Xylella fastidiosa Hib4: XFHB_11015
Entry
XFHB_11015        CDS       T04925                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
xfh  Xylella fastidiosa Hib4
Pathway
xfh00010  Glycolysis / Gluconeogenesis
xfh00020  Citrate cycle (TCA cycle)
xfh00260  Glycine, serine and threonine metabolism
xfh00280  Valine, leucine and isoleucine degradation
xfh00310  Lysine degradation
xfh00380  Tryptophan metabolism
xfh00620  Pyruvate metabolism
xfh00630  Glyoxylate and dicarboxylate metabolism
xfh00640  Propanoate metabolism
xfh00670  One carbon pool by folate
xfh00785  Lipoic acid metabolism
xfh01100  Metabolic pathways
xfh01110  Biosynthesis of secondary metabolites
xfh01120  Microbial metabolism in diverse environments
xfh01200  Carbon metabolism
xfh01210  2-Oxocarboxylic acid metabolism
xfh01240  Biosynthesis of cofactors
Module
xfh_M00009  Citrate cycle (TCA cycle, Krebs cycle)
xfh_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xfh_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:xfh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    XFHB_11015 (lpdA)
   00020 Citrate cycle (TCA cycle)
    XFHB_11015 (lpdA)
   00620 Pyruvate metabolism
    XFHB_11015 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    XFHB_11015 (lpdA)
   00640 Propanoate metabolism
    XFHB_11015 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    XFHB_11015 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    XFHB_11015 (lpdA)
   00310 Lysine degradation
    XFHB_11015 (lpdA)
   00380 Tryptophan metabolism
    XFHB_11015 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    XFHB_11015 (lpdA)
   00670 One carbon pool by folate
    XFHB_11015 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xfh04147]
    XFHB_11015 (lpdA)
Enzymes [BR:xfh01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     XFHB_11015 (lpdA)
Exosome [BR:xfh04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   XFHB_11015 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Biotin_lipoyl Pyr_redox_3 FAD_oxidored NAD_binding_8 DAO HI0933_like FAD_binding_2 GIDA AlaDh_PNT_C BSH_CzcB BSH_YknX 3HCDH_N Amino_oxidase Thi4 Lys_Orn_oxgnase BSH_Fcp1 MCRA
Other DBs
NCBI-ProteinID: ALR07289
LinkDB
Position
2363125..2364936
AA seq 603 aa
MTVIEIKVPDIGDYSKVPVIEVLVTVGDHVVKNQGILTLESDKATLEVPSMNNGVVKELK
VNVGDLLSQGDMILLLETEDTTAPPSPSNTATSDTTSPPPPSPQPAASKPTAPDQQHADI
TCRMVVLGAGPGGYTAAFRAADLGLDTVLVERYPNLGGVCLNVGCIPSKALLHAAAVIDE
AAHASTFGIDFGKPKITLDTLREYKQNVVNKLTAGLAGMAKQRKVRTVTGIAHFVSPNTL
DITTADGSTQRLHFQQCIIATGSHPVKLPNFPWDDPRIMDSTDALELAEVPKKLLVVGGG
IIGLEMATVYNALGSHVTIVEFMDQIIPGTDKDLVKPLADRMKKQGIEIHLNTKASHVKA
DKKGITVSFEAPTQGTQPALKTSTYDRVLVAVGRTPTGNNIGAEKAGVNVTERGFIPVDR
QMRSNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAAETESGKHREWVARVIPSVAYTN
PEIAWIGMTETEAKAKSLNIGVAKFPWAASGRAIGIGRTEGFTKLIFDEDTHRIIGGAIV
GVHAGDLLAEIGLAIEMGAEAEDISHTIHAHPTLSESIAMSAEVYDGTITDLYLPKKPAT
SAK
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgacggtgattgaaatcaaagttcccgatatcggcgattacagcaaggtcccagtcatc
gaagtgctggttaccgttggcgaccacgtggtcaaaaaccaaggaatcctcacattagaa
tcagacaaagccaccttggaagtgccatcgatgaataatggcgtggtcaaggaactgaaa
gtcaacgtcggcgatttgctttcacaaggcgacatgatcctcctgctggagaccgaagac
accaccgcccccccctcaccaagcaacacggcgacatccgacaccacctcaccgcccccg
ccatccccccaaccagccgcttccaagccgacagcccccgatcaacaacacgccgacatc
acgtgccgcatggtcgtactcggtgccggtcccggcggctacaccgcagcattccgcgcc
gctgacctcggcttggatacagtcctcgttgaacgctatcccaacctaggtggcgtctgc
ctcaatgtcggctgcattccttccaaagcattactgcacgcagccgccgtcatcgacgaa
gctgcacatgccagcacctttggaattgattttggcaaacccaaaatcaccctagacaca
ctgcgcgaatacaaacaaaacgtagtcaacaaactgactgccggcttggccgggatggcc
aaacaacgcaaggtacgcaccgtcaccggcatcgcgcacttcgtctctcccaacacactg
gacattaccactgctgacggcagcacccaacgactccatttccaacaatgcatcattgct
accggctcacacccagtgaagctaccaaacttcccttgggacgacccgcgcatcatggac
tccactgacgcactggaactggccgaagtgccaaaaaaactgcttgtcgttggtggcggc
atcatcggcctagaaatggctaccgtgtacaacgccctgggcagccacgtcaccattgtc
gaattcatggaccagatcatccccggcaccgacaaagatctagtgaagccactggcggac
cgcatgaaaaaacagggcattgaaatacacctgaacaccaaagcgagccacgtcaaagcc
gacaaaaaaggaatcaccgtctcattcgaagcacccacccaaggcacacaacccgcatta
aaaacatcgacctatgatcgcgtccttgttgccgtcggccgtacaccgacaggcaacaac
atcggcgctgaaaaagcaggcgtcaacgtcaccgaacgcggcttcatcccggttgatcgc
caaatgcgcagcaacgtaccccatatctttgccattggagacattgttggtaacccaatg
ctggcgcacaaagccacacatgaaggcaaactggccgccgaagtcgccgctgctgaaaca
gagtccggcaaacatcgggaatgggttgcccgcgtgatcccatccgtggcctacaccaac
ccggaaattgcctggatcggtatgactgaaaccgaagccaaagcgaaaagcctgaatatc
ggcgtcgccaaattcccctgggctgccagcggtcgcgctatcggcatcggacgcactgaa
ggcttcactaaactcatcttcgacgaagacacacaccgcatcattggcggagcgatcgtc
ggtgtccacgcaggcgacctcttggctgaaatcggactcgccatcgaaatgggtgccgaa
gccgaagacatcagccacaccatccacgcacaccccacactaagcgaatcgattgccatg
agcgccgaagtctacgacggcaccatcaccgacttgtatctccccaaaaaacccgccact
tcagcaaagtaa

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