Xylella fastidiosa Hib4: XFHB_11940
Help
Entry
XFHB_11940 CDS
T04925
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
xfh
Xylella fastidiosa Hib4
Brite
KEGG Orthology (KO) [BR:
xfh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xfh03032
]
XFHB_11940 (gyrA)
03400 DNA repair and recombination proteins [BR:
xfh03400
]
XFHB_11940 (gyrA)
Enzymes [BR:
xfh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
XFHB_11940 (gyrA)
DNA replication proteins [BR:
xfh03032
]
Prokaryotic type
DNA Topoisomerases
XFHB_11940 (gyrA)
DNA repair and recombination proteins [BR:
xfh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XFHB_11940 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
Motif
Other DBs
NCBI-ProteinID:
ALR07437
UniProt:
A0ABC8AG06
LinkDB
All DBs
Position
complement(2567469..2570150)
Genome browser
AA seq
893 aa
AA seq
DB search
MAETAKEIIKVNLEDEMRKSYLDYAMSVIVGRALPDARDGMKPVHRRVLYAMHELGAHSD
KSYFKSARIIGEVLGKYHPHGDQSVYDTLVRMAQPFSLRYLLVEGQGNFGSVDGDPAAAM
RYTESRMSRISHDLMADIDKETVDFQPNYDEKETEPTVMPTRFPNLLVNGSSGIAVGMAT
NIPPHNLVESINACIALIDNPELDVDGLMEYIPGPDFPTAGIINGTAGIVAGYRTGRGRV
RMRAKADIEVADNGREAIVVTEIPYQVNKARLIEKIAELVKEKRIDGISELRDESDKDGM
RIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLLNLKQILQAFIRHRREV
VTRRTIFELRKARARAHVLEGLTVALANIDEMIHLIKTSPSPQEAKERLLAKTWAPGLVG
TLLSASGGEASRPEDLPQGVGLIGDSYQLTEVQVRQILEMRLHRLTGLEQDKLAEEYQQL
LEIIVGLIRILENPDVLLQVIRDELLKIREEYGDVRRTEIRHSEEDLDILDLIAPEDVVV
TLSHAGYAKRQPVSAYRAQKRGGRGRAAVTTKEEDFIDHLWLVNTHDTLLTFTSTGKVFW
LSVYQLPEAGSNARGRPIINWIPLEPGEKVQAVLPVREYAENHYVFFATRQGTVKKTPLS
EFAFRLARGKIAINLDQGDALIGVALTDGERDVLLFASNGKTVRFSENTVRSMGRTATGV
RGIKLTEGEEVVSLIIAEPATGVDMLEEAEETADDDIQTANTADSVHIDPTQDDILCILT
ATENGYGKCTPLAHYPRKGRGTQGVIGIQTTERNGRLVAAVLLGATDEVLLISDGGTLVR
TRGSEISRVGRNTQGVTLIRLSNGEKLQAVERLDASLSIPDETEDDPGTVHPA
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaccgccaaggaaatcatcaaggtcaatctggaagacgagatgcgtaagagc
tacctcgattatgcgatgagcgtaatcgtaggtcgtgcactccccgatgctcgcgatggc
atgaagcctgtgcatcgccgcgtcctgtacgccatgcatgaacttggtgctcacagcgac
aagtcctacttcaaatcggcacgtatcatcggtgaagtgctcggtaagtaccatccgcat
ggtgatcagtctgtttacgacaccctggtacgtatggcgcaacccttctcgttgcgttac
ttactggtagagggccaaggtaactttggttcggtggacggcgatcctgccgccgcgatg
cgttacaccgagtcccgcatgtcgcggatcagccacgacctgatggctgacatcgataaa
gagaccgtcgacttccagcccaattacgacgaaaaagaaacggaaccaacggtcatgccg
acccggttcccgaatctattggtcaatggatcgtccgggattgcagtgggcatggccacc
aatatcccgccccataacctcgtcgaatccatcaacgcttgcattgcccttattgataat
ccagaactggatgtcgatggattgatggaatacatccccggtccggatttccccaccgcc
ggcatcatcaacggcaccgctggcattgttgctggctaccgtaccggtcgtggtcgcgtc
cgcatgcgtgccaaggcggatattgaagtggccgacaatggccgtgaagccatcgttgtt
actgagattccttaccaagtcaacaaagcacgtttgatcgaaaaaattgctgagttggtg
aaagaaaagagaattgatggcatcagcgaattgcgtgatgaatccgacaaagacggcatg
cggatttatatcgaaatcaaacgtggcgagtcggctgaggttgtcctcaataacctctac
caacagacccagatggagtcggtattcggaattaacatggtggcactggttgacggccgc
ccccaactactcaacctcaaacagatactgcaagccttcatccgtcaccgccgcgaagtg
gtcacccgccgcaccatcttcgaactgcgcaaagcccgtgcccgtgcccacgtcctggaa
ggtttgacggttgccctggccaacattgacgagatgattcacctgatcaaaacctcgcca
agcccacaagaagcaaaagagcgcctgctcgccaaaacctgggcacctggattggtcggt
acattgctcagtgcctcaggtggtgaagcatcgcgcccggaagatctcccgcaaggcgtg
gggctgattggcgattcctatcaactgaccgaagtccaagtacggcagattttggaaatg
cgcctgcaccgcctcaccggactggaacaggacaaacttgccgaagagtaccagcagctg
ctagagatcattgtcggcctgatccgcatcttggagaacccggatgtcctattacaggtc
attcgcgatgaactcctcaagatacgtgaagaatatggcgatgtacgccgtaccgagatc
cgccatagcgaagaagacctagacatcctcgacctcattgcaccggaggatgtcgtcgtc
accctgtcccacgccggctatgccaagcgtcagcctgtgtccgcctaccgtgcccaaaag
cggggagggcgtggccgcgctgctgtgaccacaaaagaagaagacttcattgaccatctc
tggctggtcaacacccacgacaccctgttgaccttcaccagcaccggcaaagtattttgg
ctgtctgtgtaccaattgccagaagccggctccaacgcccgaggtcgccccatcatcaac
tggatccccttggagccaggcgaaaaagtgcaggccgtccttcccgtacgcgaatacgct
gagaaccactatgtgttttttgccacccgccaagggaccgtcaaaaagactcccttgagc
gaatttgcattccgcttagcgcgcggcaaaatcgcgatcaaccttgatcaaggagatgcc
ctgattggtgttgctctgaccgatggcgaacgtgatgtcctgctctttgcctccaatggc
aagaccgtgcgtttcagtgagaacactgtccgctcaatgggccgcaccgccacgggcgtg
cgcggtatcaaactgaccgaaggagaagaggtggtcagcctcatcattgccgaaccggca
actggtgtggatatgctcgaagaagcggaagaaacggcagacgacgacatccagacagcc
aacactgccgacagcgtgcacattgatcccacccaggatgacatcctctgcatcctgacc
gccactgaaaacggctacggcaaatgtacccccctggctcattaccctcgtaaaggccgt
ggcactcaaggcgtcattggtatccagaccaccgagcgcaatggccgcctggttgctgcc
gtcctattaggtgccaccgacgaagtcctattgatctctgatggcggcaccttggtacgt
acccgtggctccgagatttcgcgcgttggccgtaatacccaaggtgtcaccctcatccgc
ttatccaatggtgaaaaacttcaggcagtcgagcgtctggatgcttccttgagtatcccg
gatgagacagaggacgatcccggcaccgtacaccctgcctga
DBGET
integrated database retrieval system
