KEGG   Xylella fastidiosa MUL0034: P303_02680
Entry
P303_02680        CDS       T03317                                 
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
xfl  Xylella fastidiosa MUL0034
Pathway
xfl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xfl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    P303_02680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xfl03019]
    P303_02680
   03400 DNA repair and recombination proteins [BR:xfl03400]
    P303_02680
Enzymes [BR:xfl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     P303_02680
Messenger RNA biogenesis [BR:xfl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     P303_02680
DNA repair and recombination proteins [BR:xfl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      P303_02680
SSDB
Motif
Pfam: RQC DEAD HRDC RecQ_Zn_bind Helicase_C ResIII
Other DBs
NCBI-ProteinID: AIC12149
UniProt: A0A060H5U2
LinkDB
Position
complement(558276..560078)
AA seq 600 aa
MSTSSATQTVLQRVFGYDTFRGPQQAIIEHVAAGHDALVLMPTGGGKSLCYQVPALLRKG
IGVVISPLIALMQDQVETLRQLGVRAAYLNSTLDATQAQRIEHALVTADLDLLYIAPERL
LTAHFLSLLERSQIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPHVPRIALTATADP
PTQREIAERLDLSDAHHFISSFDRPNIRYTVVQKNNMRHQLQEFLSRHRNTAGIVYAMSR
RKTEEIAAYLCTQGYNALPYHAGLPAETRAKHQRCFLREEGIVMCATIAFGMGINKPDVR
FVAHIDLPKSLEGYYQETGRAGRDGEAAEAWMCYSLGDVVLLKQMIEQSEASEARKCVER
AKLDHLLGYCESMQCRRQLLLSSFGETYPNPCGNCDNCLTPATAWDATVLSQKALSCVYR
TGQRFGVGHLIDILRGSKSQRILQLGHDQLSTYGIGRDVDERSWRSVFRQLIATHLLEVD
NEGYGGLRLTPSSRPVLKGERQVMMRRDQFIRERDRTGQRHGLSVLPEDLGLFNALHRLR
AQLAKEQNVPAFVIFHDSTLRHIAEQRPTNLNALSKISGIGSNKLTRYGHQLIELVLAQG
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgagcacgtcttccgccacccagaccgttctacaacgcgtctttggctacgacaccttc
cgtgggccccagcaagccatcattgagcatgtcgctgccggccacgatgccttggtcctg
atgcccaccgggggcggcaaatcattgtgctaccaagtgcctgcgctgctgcgcaaaggc
atcggcgtcgtcatctcgccgctgattgcactgatgcaagaccaagtcgagaccctacgt
cagcttggcgtacgcgccgcctatctcaactcgaccctagatgcaacgcaggcacaacgg
atcgaacacgctctagtcaccgcagatctagacctgctgtatatcgctccggaacggtta
ctcactgcacacttcttatcgctgctggaacgtagccagatcgctttgttcgccatcgac
gaagctcactgcgtctcacagtggggacatgatttccgtcccgaataccgccaactcacc
gtacttcatgaacgttggccacacgtgcctcggattgcactgaccgcaaccgccgaccca
cccacacaacgcgaaattgctgagcgccttgacctaagcgatgcgcatcacttcatcagc
tcattcgaccgccccaacatccgctacacagtcgtacagaaaaacaatatgcggcaccaa
ctacaagaattcctcagccgccatcgcaacaccgcaggcattgtctacgccatgtcacgg
cgcaaaaccgaagaaatcgccgcctatctgtgtacacaaggctacaacgcactgccttac
catgccggcctaccagccgaaacacgggccaagcaccaacgctgctttctgcgtgaagaa
gggattgtgatgtgtgccaccatcgccttcggcatgggcatcaacaaacctgatgtccgc
tttgtcgcccacatcgacctccccaaatcactggagggttattaccaggaaaccggccgc
gccggccgcgatggcgaagctgcagaagcatggatgtgctatagcctgggagacgtcgta
ctgctgaaacaaatgatcgaacaaagcgaagccagcgaagcacgcaagtgcgtagaacgc
gccaaactcgatcacctgctgggctactgtgaatcaatgcaatgccgccgccaactctta
ctgtcaagcttcggggaaacctatccaaacccctgtggcaactgtgacaactgcctgacc
ccagccaccgcctgggatgccaccgtgctctcccaaaaggcgttaagttgcgtctaccgc
actggccagcgcttcggggttggccacctaatcgacatactacgtggcagtaagagccaa
agaatattgcaactgggtcatgaccaactcagcacctacggcatcggccgtgacgtggat
gaacgcagctggcgcagtgtctttcgccaactcatcgccacacacctgttggaagtcgac
aacgaaggctacggcggcttacgcctgaccccaagcagtcgtccagtcctcaaaggcgaa
cgccaagtcatgatgcgtcgtgatcagttcatccgtgaacgcgaccgtaccggccaacgt
cacggactatcggtcctcccggaagatctgggactcttcaatgccctgcatcgcttacgt
gcacaactagccaaagaacaaaacgtgccggcattcgtgatcttccatgacagcaccttg
cgccatattgccgagcaacgccctactaacctcaatgcactgagcaaaatcagcgggatc
ggcagcaacaaactgacacgctatggccatcagttaattgaactcgtacttgcgcaaggg
tga

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