Xylella fastidiosa MUL0034: P303_02680
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Entry
P303_02680 CDS
T03317
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
xfl
Xylella fastidiosa MUL0034
Pathway
xfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P303_02680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xfl03019
]
P303_02680
03400 DNA repair and recombination proteins [BR:
xfl03400
]
P303_02680
Enzymes [BR:
xfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P303_02680
Messenger RNA biogenesis [BR:
xfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P303_02680
DNA repair and recombination proteins [BR:
xfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P303_02680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIC12149
UniProt:
A0A060H5U2
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All DBs
Position
complement(558276..560078)
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AA seq
600 aa
AA seq
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MSTSSATQTVLQRVFGYDTFRGPQQAIIEHVAAGHDALVLMPTGGGKSLCYQVPALLRKG
IGVVISPLIALMQDQVETLRQLGVRAAYLNSTLDATQAQRIEHALVTADLDLLYIAPERL
LTAHFLSLLERSQIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPHVPRIALTATADP
PTQREIAERLDLSDAHHFISSFDRPNIRYTVVQKNNMRHQLQEFLSRHRNTAGIVYAMSR
RKTEEIAAYLCTQGYNALPYHAGLPAETRAKHQRCFLREEGIVMCATIAFGMGINKPDVR
FVAHIDLPKSLEGYYQETGRAGRDGEAAEAWMCYSLGDVVLLKQMIEQSEASEARKCVER
AKLDHLLGYCESMQCRRQLLLSSFGETYPNPCGNCDNCLTPATAWDATVLSQKALSCVYR
TGQRFGVGHLIDILRGSKSQRILQLGHDQLSTYGIGRDVDERSWRSVFRQLIATHLLEVD
NEGYGGLRLTPSSRPVLKGERQVMMRRDQFIRERDRTGQRHGLSVLPEDLGLFNALHRLR
AQLAKEQNVPAFVIFHDSTLRHIAEQRPTNLNALSKISGIGSNKLTRYGHQLIELVLAQG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgtcttccgccacccagaccgttctacaacgcgtctttggctacgacaccttc
cgtgggccccagcaagccatcattgagcatgtcgctgccggccacgatgccttggtcctg
atgcccaccgggggcggcaaatcattgtgctaccaagtgcctgcgctgctgcgcaaaggc
atcggcgtcgtcatctcgccgctgattgcactgatgcaagaccaagtcgagaccctacgt
cagcttggcgtacgcgccgcctatctcaactcgaccctagatgcaacgcaggcacaacgg
atcgaacacgctctagtcaccgcagatctagacctgctgtatatcgctccggaacggtta
ctcactgcacacttcttatcgctgctggaacgtagccagatcgctttgttcgccatcgac
gaagctcactgcgtctcacagtggggacatgatttccgtcccgaataccgccaactcacc
gtacttcatgaacgttggccacacgtgcctcggattgcactgaccgcaaccgccgaccca
cccacacaacgcgaaattgctgagcgccttgacctaagcgatgcgcatcacttcatcagc
tcattcgaccgccccaacatccgctacacagtcgtacagaaaaacaatatgcggcaccaa
ctacaagaattcctcagccgccatcgcaacaccgcaggcattgtctacgccatgtcacgg
cgcaaaaccgaagaaatcgccgcctatctgtgtacacaaggctacaacgcactgccttac
catgccggcctaccagccgaaacacgggccaagcaccaacgctgctttctgcgtgaagaa
gggattgtgatgtgtgccaccatcgccttcggcatgggcatcaacaaacctgatgtccgc
tttgtcgcccacatcgacctccccaaatcactggagggttattaccaggaaaccggccgc
gccggccgcgatggcgaagctgcagaagcatggatgtgctatagcctgggagacgtcgta
ctgctgaaacaaatgatcgaacaaagcgaagccagcgaagcacgcaagtgcgtagaacgc
gccaaactcgatcacctgctgggctactgtgaatcaatgcaatgccgccgccaactctta
ctgtcaagcttcggggaaacctatccaaacccctgtggcaactgtgacaactgcctgacc
ccagccaccgcctgggatgccaccgtgctctcccaaaaggcgttaagttgcgtctaccgc
actggccagcgcttcggggttggccacctaatcgacatactacgtggcagtaagagccaa
agaatattgcaactgggtcatgaccaactcagcacctacggcatcggccgtgacgtggat
gaacgcagctggcgcagtgtctttcgccaactcatcgccacacacctgttggaagtcgac
aacgaaggctacggcggcttacgcctgaccccaagcagtcgtccagtcctcaaaggcgaa
cgccaagtcatgatgcgtcgtgatcagttcatccgtgaacgcgaccgtaccggccaacgt
cacggactatcggtcctcccggaagatctgggactcttcaatgccctgcatcgcttacgt
gcacaactagccaaagaacaaaacgtgccggcattcgtgatcttccatgacagcaccttg
cgccatattgccgagcaacgccctactaacctcaatgcactgagcaaaatcagcgggatc
ggcagcaacaaactgacacgctatggccatcagttaattgaactcgtacttgcgcaaggg
tga
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