Xylella fastidiosa MUL0034: P303_12235
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Entry
P303_12235 CDS
T03317
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
xfl
Xylella fastidiosa MUL0034
Pathway
xfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P303_12235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xfl03021
]
P303_12235
03019 Messenger RNA biogenesis [BR:
xfl03019
]
P303_12235
Transcription machinery [BR:
xfl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
P303_12235
Messenger RNA biogenesis [BR:
xfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P303_12235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
CBP_BcsO
AAA
Spore_III_AA
OB_RNB
AAA_22
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AIC14149
LinkDB
All DBs
Position
complement(2483638..2485332)
Genome browser
AA seq
564 aa
AA seq
DB search
MSDITSSESGSATSHGESEKTVRKIRTSKSSVESSQQSVTHQTVQPQTPETEAQRAAHLE
SAPPPSQVMSQTSATTPSVQDSSESAEDYGQQNQRFNNNRRDRFRNRRERNRDRFRDENN
SNGEDGNHEPYMPRPHPSVPEGFPIYSLSDLKKMPAHKLLEIAEQLNIHEGVARARKQDV
IFALLKVLTRHGEGVFADGVLEILPDGFGFLRAAEASYLAGPDDTYISPSQIRRFNLRTG
DHLSGRIRFPKDGERYFALSIVDTINGEPLEASKNKILFENLTPLFPRKRFRLERADGST
EDITGRILDLMAPQGKGQRALIVSPPKAGKTMLMQQVATAITTNHPEVHLIVLLIDERPE
EVTEMQRTVRGEVISSTFDEPAARHVQVAEMVIERAKRLIEHKKDVVILLDSITRLARAY
NNVVPSSGKVLTGGVDAHALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEE
FKGTGNCELHLNRRIAEKRVYPAIDINRSGTRREDLLIESDLLQKIWILRKLLHPMDEIA
AIEFVLDKMKNTKSNDEFFGSMKR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgatatcacaagttccgaaagcgggagcgctacctcgcatggcgaaagcgaaaaa
accgtgcgtaaaatccgcacaagcaagtccagtgtggaaagtagccaacaatccgtgaca
caccaaaccgtacagccacaaacaccagagaccgaagctcaacgtgctgcgcatttggaa
tcagccccccctccctcgcaagtcatgtcccaaacgtctgcaaccactccctccgtacag
gacagcagtgaatcagcagaagactatgggcaacagaaccagcgattcaataacaacaga
cgggatcgcttccggaaccgacgcgagcgtaatcgtgatcgtttccgcgatgaaaacaat
agcaacggtgaagacggcaaccacgaaccatacatgccacgtccacacccaagtgtgcca
gagggattcccaatatattcgctgagcgatctgaaaaagatgccagcacacaaactgcta
gaaatcgctgagcaactcaacatccacgaaggtgtagcgcgtgcacgcaagcaagatgtg
atctttgcacttctaaaagtactgacccgtcacggcgaaggcgtgtttgctgacggcgtt
ctggaaatccttccagatggttttggctttctgcgcgcagccgaagccagctacttggcc
ggtccagacgatacctatatttcccccagtcaaattcgccgcttcaatctacgcactggt
gatcacctgtcgggccggattcgtttccctaaggacggtgaacggtactttgcattgtca
atcgttgatacgattaatggcgaacctctggaagcttccaaaaataagatcctttttgag
aacctgaccccactgtttccacgcaaacgcttccgtttggaacgcgctgacggctcgaca
gaggatattaccggccgcatccttgatttgatggcaccacaaggcaaggggcaacgtgca
ctaatagtatccccccccaaagccggtaaaacgatgctaatgcaacaggtagcaacggcg
atcactaccaatcatccagaagtacacctgattgtattactgattgacgaacgtcctgaa
gaagtgacagaaatgcagcgcactgttcggggcgaagttatttcctcaacgtttgacgag
ccagctgcacgccatgtacaagtcgccgaaatggtcatcgaacgcgcaaagcgcttaatc
gaacataaaaaggatgtagtcatcctacttgactcaatcacccgtttggcacgtgcctat
aacaacgttgtacccagctcaggcaaggtactcactggtggcgtggatgcacacgcacta
catcgccccaaacgcttcttcggtgcagcacgcaatgtcgaagaaggtggctcgctgacc
atcatcgcaaccgcactcatcgataccggcagcaaaatggatgaggtaatctatgaagag
ttcaagggtactggcaactgcgagttacatctaaatcgccgtattgccgagaaacgcgta
tatccggcaattgatatcaaccgttccggtactcgccgtgaagatttattgatcgaatcc
gatctattgcagaaaatttggatcctccgcaaattactgcacccaatggacgagattgca
gcaatcgagtttgtgcttgataaaatgaagaacaccaagtcgaacgacgagttctttggt
tcaatgaagcgctaa
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