Xylella fastidiosa M12: Xfasm12_0142
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Entry
Xfasm12_0142 CDS
T00677
Name
(GenBank) Tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
xfm
Xylella fastidiosa M12
Pathway
xfm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Xfasm12_0142
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xfm01007
]
Xfasm12_0142
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xfm03016
]
Xfasm12_0142
03029 Mitochondrial biogenesis [BR:
xfm03029
]
Xfasm12_0142
Enzymes [BR:
xfm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
Xfasm12_0142
Amino acid related enzymes [BR:
xfm01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Xfasm12_0142
Transfer RNA biogenesis [BR:
xfm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Xfasm12_0142
Prokaryotic type
Xfasm12_0142
Mitochondrial biogenesis [BR:
xfm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Xfasm12_0142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
SYY_C-terminal
GatC
VBS
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
ACA11179
LinkDB
All DBs
Position
168168..169424
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AA seq
418 aa
AA seq
DB search
MSLVSNSIALIERGANEILKFDELERRLRSGRPLRIKAGFDPTSPDLHLGHTVLLNKMRQ
FQDLGHQVVFLIGDFTGMIGDPTGKNVTRKPLSREDVLANASTYEDQVFKVLDRTLTEVR
FNSEWFGKMSAVDMIKLAAQHTVARMLERDDFAKRFASQHPIVIHEFLYPLIQGYDSIAL
RADVELGGTDQKFNLLMGRALQEHHGQPPQIVLTMPLLEGLDGVAKMSKSLGNYIGIKEP
PIDIVTKTMKIGDDLMWRWIELLSFKISAAEAVALREAVAKSELNPREVKLRLAHELVSR
FYDNAAAEKAIAGWQAVVTGQGNNNLLPLQKINVPADGVRLVALLTKSGLAPSNSEAMRK
LKERAVRVDGIVVDDAHLHFVPGFEGLIQIGKRNFIKVRLVTSSESHEFPESNRIDKS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggtttcaaattctattgctctcattgaaagaggtgctaatgagatacttaaa
ttcgatgaattagagcgtcgcttgagaagcgggcgtccgcttcggatcaaggcaggtttc
gatccgacttcccctgatctgcatttggggcataccgtcttgctgaacaagatgcggcaa
tttcaggatcttggtcaccaagttgtttttctgattggtgattttactgggatgattggt
gacccgactggtaagaacgttacccgtaagccactcagtcgtgaggatgtattggctaat
gccagtacctacgaggatcaggtatttaaggttttggatcgtacacttaccgaggtgagg
ttcaattccgaatggtttgggaagatgagtgctgtcgatatgatcaagctcgcggctcag
cacactgttgctcgcatgcttgagcgggatgacttcgccaagcgctttgcttctcagcac
ccgattgtgatccatgaattcctttatccactgattcagggctatgactctattgctttg
cgagctgatgttgaactcggtggtacagatcagaagtttaatttattgatggggcgagcc
ttgcaagagcatcatggtcagccacctcagattgtattaactatgccgctgcttgagggc
ctggatggcgtagctaagatgtccaagtccctgggaaattacattggtattaaagagccg
cctatcgacattgttacaaaaactatgaagattggtgacgatctgatgtggcgttggatc
gaactgctttcttttaagatcagcgccgctgaagcggttgcattgcgtgaagcggtcgca
aaatcggaactgaatccgcgtgaggttaaattacgtctagctcatgagcttgtgagccgt
ttctatgataatgcagcagccgaaaaagcaatcgctggttggcaagcggtggtgacaggg
caaggtaacaacaacctgttgccgttacagaagattaatgttcctgcggatggggtgcgc
ctcgttgcattgttgacaaagtctggactagctccaagtaactctgaggcaatgcgaaag
cttaaggagcgagctgtacgtgtcgatggtattgtagtggatgatgctcatctacacttt
gtgccaggctttgagggattaattcaaattggtaagcgcaattttattaaagtcaggttg
gtaacttcttcggaatctcacgagtttcctgagtctaatcgtattgacaagagttag
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