Xylella fastidiosa M12: Xfasm12_0371
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Entry
Xfasm12_0371 CDS
T00677
Name
(GenBank) Phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
xfm
Xylella fastidiosa M12
Pathway
xfm00030
Pentose phosphate pathway
xfm01100
Metabolic pathways
xfm01120
Microbial metabolism in diverse environments
xfm01200
Carbon metabolism
Module
xfm_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
Xfasm12_0371
Enzymes [BR:
xfm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
Xfasm12_0371
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Gene cluster
GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
ACA11385
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Position
complement(428704..430620)
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AA seq
638 aa
AA seq
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MRPHPNIQAVTDHIRQRSATTRTNYLAGIDAALRDGPSRSRLSCGNLAHGFAACGTTDKE
RLREAITPNLGIITAYNDMLSAHQPFEHYPDIIRNTARALGATAQVAGSVPAMCDGVTQG
RAGMELSLFSRDNIAQSTAIGLSHDMFDAAIYLGVCDKIVPGLLIGALAFGHLPAAFVPA
GPMPSGIPNKQKAEIRERYAAGQATRAELLAVEAASYHAPGTCTFYGTANSNQVLLEAMG
VQLPGASFVSPGTPLREALTQAATERVLHITALGQDFRPIGRLIDERAIVNAIVALMATG
GSTNHTIHWIAVARAAGILLTWDDMDRISQTVPLLARVYPNGEADVNRFHAAGGTAFVFR
ELMDAGLMYDDLPTIVAGGMRAYTQEPHLHHGTLGYSPSPTTSTDASVVRPVTHPFEPQG
GLRLLHGNLGRALIKLSAVKPEYRAIEAPAVVIDTPQTLHKLHAAGALPKDFILVVRYQG
PRANGMPELHSLAPLLGLLQNQGRRIALVTDGRLSGASGKFPTAIHLTPEAARGGPIGRI
REGDLLRLDGEAGILEALVPTTEWETRTPAPNTATTSNDLGRNLFAINRQVVGPADQGGL
SISCGPAPPDNHVWSNTANDTPDDHAHPGPLTDESQDA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccacatcccaacattcaagccgtcaccgaccatatccgccaacgcagcgccacc
acgcgcaccaactacctcgccgggattgatgcagcactgcgcgacggaccatcccgcagc
cgcctaagctgcggcaacctcgcccacggcttcgccgcctgcggcacgactgataaagaa
cgtctacgggaagcaatcaccccgaacctaggcatcattaccgcctacaacgacatgctt
tcggcacaccaaccgtttgaacattacccagacatcatccgtaacacggcgcgcgcactg
ggtgccaccgcacaagtcgccggcagtgtcccggccatgtgcgatggtgtcacccaaggc
cgtgcaggcatggaactgtcgctattctcacgcgacaacattgctcaaagcactgctatc
ggactcagccacgacatgttcgacgcagcaatctacttgggcgtatgcgacaaaatcgtc
cccggcctgctgatcggcgcattggcatttggccacctacccgccgcattcgtccctgca
ggacccatgccctccggcatcccaaacaaacaaaaagcagaaatacgcgaacgctacgcg
gctggtcaggcaacacgtgctgaactgctcgcagtcgaggcagcctcctaccacgctccc
ggaacctgcaccttctatggcaccgccaattccaaccaagtattgctggaagcaatgggc
gtgcaattacccggcgcctcgtttgtctctccaggcaccccactgcgtgaggcactgacc
caagccgccacagaacgcgtcctgcacatcaccgcactggggcaggatttccgcccgatt
gggcgattaatcgacgaacgcgccatcgtgaatgccatcgtcgccctcatggctacaggc
ggctcaaccaaccacaccatccactggatcgccgtcgcacgtgcagccggcatcttgcta
acctgggacgatatggatcgcatctcccaaaccgtaccactccttgcacgcgtgtatccc
aacggtgaagccgatgtcaatcgattccatgccgccggtggcactgcctttgtgttccgt
gaactgatggatgccggactgatgtacgacgacttgccaaccatcgtcgcaggcggcatg
cgggcctacacccaagaacctcacctacatcacggcacactcggctacagcccctcaccg
accaccagcaccgacgcatccgtagtccgcccggtgacccatccattcgaaccccaagga
ggcctgcgcctcctacatggcaacctaggccgtgcgctcatcaaactgtcggcggttaaa
ccggaataccgggccatcgaagcgccagccgtggtgatcgacacaccacagacactgcat
aaactgcatgccgcaggtgcactccccaaagatttcatcctggtcgttcgctatcaagga
ccgcgtgccaacggaatgccagaacttcactcgctggcaccattgctaggattgctgcaa
aaccaaggccggcggatcgccctggtcaccgacggacgtctctccggcgcctcgggcaaa
ttcccgacggcgatccacttgaccccagaagcagcacggggcggcccgattggacgcatc
cgcgaaggcgacctcttacgccttgatggtgaagccggcatcttggaagccctggtaccg
acaaccgaatgggagacgcgcaccccagccccaaacacagcaaccacaagcaacgacctg
gggcgcaacctgtttgcgatcaaccgccaagtggttggccctgccgaccaaggcggactc
tcgatctcctgtggtccggcacctccggacaaccacgtgtggagcaacactgccaacgac
acgccagacgatcacgcccaccctggccccctgacagacgagtcccaagacgcctga
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