Xylella fastidiosa M12: Xfasm12_0976
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Entry
Xfasm12_0976 CDS
T00677
Name
(GenBank) DNA-binding protein
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
xfm
Xylella fastidiosa M12
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xfm03000
]
Xfasm12_0976
03036 Chromosome and associated proteins [BR:
xfm03036
]
Xfasm12_0976
03400 DNA repair and recombination proteins [BR:
xfm03400
]
Xfasm12_0976
Transcription factors [BR:
xfm03000
]
Prokaryotic type
Helix-turn-helix
Other families
Xfasm12_0976
Chromosome and associated proteins [BR:
xfm03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Xfasm12_0976
DNA repair and recombination proteins [BR:
xfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Xfasm12_0976
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
HTH_30
Phage_NinH
BrkDBD
HTH_28
Xre-like-HTH
HTH_29
HTH_23
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ACA11947
LinkDB
All DBs
Position
complement(1051686..1051958)
Genome browser
AA seq
90 aa
AA seq
DB search
MNVVPSRPEVSRGSPKSPLREHVAQVVRRYLRDLDGCDANDLYNMVLREMEIPLLVEVLN
HCEGNQSRAAALLGIHRATLRKKLKEYGLV
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgtagtaccctcccgtcccgaagtcagccgtggctccccaaagtcccccctacgt
gaacatgtagctcaagtggtgcgccgttatttgcgtgatcttgatggctgcgatgccaat
gatctctacaacatggtgctgcgcgaaatggagattcctctcttggtagaagtactgaac
cattgtgaagggaatcagagccgtgccgctgcactgcttggcattcatcgcgccacacta
cgtaagaaactcaaagagtacggattagtttga
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