Xylella fastidiosa M12: Xfasm12_1061
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Entry
Xfasm12_1061 CDS
T00677
Name
(GenBank) holliday junction binding protein, DNA helicase
KO
K03550
holliday junction DNA helicase RuvA
Organism
xfm
Xylella fastidiosa M12
Pathway
xfm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Xfasm12_1061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xfm03400
]
Xfasm12_1061
DNA repair and recombination proteins [BR:
xfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Xfasm12_1061
RecFOR pathway proteins
Xfasm12_1061
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
RecR_HhH
HHH
Transposase_20
IMS_HHH
DUF6303
Motif
Other DBs
NCBI-ProteinID:
ACA12020
UniProt:
B0U2E1
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All DBs
Position
1146867..1147451
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AA seq
194 aa
AA seq
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MIGRLRGVLTSKTPPWLVVDVCGVGYELEVPMSTFCELPDVGYEVNLFTHYTQKDDSAAL
YGFLSESERRLFRHLQRVSGIGTKIALAVLSSVSVDTFAGLIQAGDVNALTVIPGIGKKT
AERMLVELRDRAADFNNGISTSGKLNLDTVSEAALALQQLGYKPAEAARMARDAGTESDD
VATVIKKALQAALC
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgattggtcgcttgcgaggggttttgactagcaaaacgccaccgtggctcgtggttgat
gtgtgtggagttggctacgaactagaggtgccgatgagcactttttgcgaattgccagac
gtcggttacgaggtgaatttgtttactcactatacgcagaaggatgatagtgccgcgttg
tacggttttctgagcgaaagtgagcggcggctattccgccacctgcagcgggtgagtggt
atcggtaccaagatcgctttggcggttctatccagcgtcagcgtggatacatttgctggg
ttaatccaggctggtgacgttaatgcattaacggttatcccaggaattgggaagaaaacc
gctgaacgtatgctggtggagttgagagaccgtgctgcagacttcaacaatggtatttcc
acctcaggcaagctcaatcttgatacggtgtctgaagctgccttggctttgcagcaactc
ggttataagccagctgaggctgcacgtatggcacgtgatgctggtactgagagcgatgat
gttgctactgtcatcaaaaaagcgcttcaagccgcgttatgttga
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