Xylella fastidiosa M12: Xfasm12_1444
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Entry
Xfasm12_1444 CDS
T00677
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
xfm
Xylella fastidiosa M12
Pathway
xfm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Xfasm12_1444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xfm03019
]
Xfasm12_1444
03009 Ribosome biogenesis [BR:
xfm03009
]
Xfasm12_1444
03036 Chromosome and associated proteins [BR:
xfm03036
]
Xfasm12_1444
Enzymes [BR:
xfm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Xfasm12_1444
Messenger RNA biogenesis [BR:
xfm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Xfasm12_1444
Ribosome biogenesis [BR:
xfm03009
]
Eukaryotic type
90S particles
RNase
Xfasm12_1444
Prokaryotic type
rRNA processing factors
Xfasm12_1444
Chromosome and associated proteins [BR:
xfm03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Xfasm12_1444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ACA12367
UniProt:
B0U3D8
LinkDB
All DBs
Position
1508760..1509443
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AA seq
227 aa
AA seq
DB search
MISSKASDYQQRIGYVFTDPSLLLQALRHCSAGTPHNERLEFLGDSVVNLLIAEALFQRW
PRADEGALTRARSELVRETSLASIARTMQLGEQLILGPGELKSGGHRRDSILADAVEAVI
AAIYLDADLATCRTVVLPWFETALTALPVGKPEKDPKTRLQEWLQARQWSLPVYELIFES
GDPHTKHFRVSCTLGELKLRTEGEGSSRRLAEQDAASHAINQLDSNK
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgatatcaagtaaggccagcgattaccaacagcggattggctatgtgtttaccgatcca
tctctgctgctgcaagcactgcgtcactgtagtgccggcaccccgcacaatgagcgcctg
gagttcctcggcgacagcgtggttaacttgctgatcgccgaagcgcttttccaacgctgg
ccacgtgctgacgaaggagcattaacccgtgcccgttccgaactggtgcgtgaaacatct
ctggcctcgattgcacgcaccatgcaattaggggagcaactcatccttggaccaggtgaa
ctcaaatctggaggacaccgccgcgactccatccttgccgatgcagtagaagcagtgatt
gcagccatttatctcgacgccgatttagcaacgtgccgtactgtggtgttaccgtggttt
gaaacagcactcaccgcattgcctgttggcaaacccgaaaaagacccgaaaactcgactc
caagaatggctacaagcacgccagtggtcattacccgtgtatgaattgatcttcgagagc
ggcgatcctcataccaagcacttccgagtgagttgcactctgggtgaactaaaactgcgc
accgaaggcgaaggcagctcacgccgtctcgccgagcaagacgctgcctctcacgccatc
aaccaactggattcaaacaagtga
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